| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is acoA [H]
Identifier: 124021816
GI number: 124021816
Start: 103093
End: 103935
Strand: Direct
Name: acoA [H]
Synonym: P9303_01031
Alternate gene names: 124021816
Gene position: 103093-103935 (Clockwise)
Preceding gene: 124021815
Following gene: 124021817
Centisome position: 3.84
GC content: 35.82
Gene sequence:
>843_bases ATGCGTGCATTTCAATTGGCAATAGCAGATGAATACCATAATCAAAAAATGAGATGTCCTGTTCATTTATCGATAGGACA AGAATATTGGTTACCCTTGGTCAAGAAATTTTTTCAAAAAACAGATCGTTGTTTTTCAAGTCATCGATCACATAGTATGT ATTTGGCGTTAGCTTGTGATCCCGAATCGCTCATAGCAGAACTACATGGATCTGCATTTGGATCATTGCAGGGATTAGGC GGTAGTATGCATTTAAAAGAACTTGATTCAGGTCTGGAAGCTTCTATACCTATTGTTGGAAGTTCAATAGCTCTTGGTGT GGGTAGTGCTTTATCAGCTAAACATTCTAAGAATGATGTACTAACAATTTCATATTTTGGAGATGGAGCTTGTGAAGAGG GAATCTTTCATGAGTGTTTAAATCTAGCTGCCCTTTATAAGCTACCCATACTATTCATCTGTGAGAATAATAGCTATTCT TGTAATACACATTACAGCAATCGACAAACAGCAAATGATATGACTAGATTTCCTCTGTCACATGGAATGACCAATTTTAA AATTAACAATTTTGATCCATATCTTTTTATTGAATCCACAATGGAAAAATGCTTTTCCTTGGCTAGGGATAGACCTGTTT TTCTTGAAATCTCCTCTTATCGGTTATATGAACACTGTGGACACCTGATCGACTTAGATCGAGGGGACAGGACTTACGAT GAATACCTATATTATCAACGTATAGACCCTGTCAATCAAATGCTATCCATCTACCCGAACTTAAAAAACGATGAAACTAT TTGGAAGAAATATTATATTGACTTGATTCGTAAGTATGAGTAG
Upstream 100 bases:
>100_bases ATTCAATAGTAAATAATAAGATCGACCATATCAACTTTATTTAAACATGCAAGATAAATATCCAGATCAATACATGTATT TATACAAGGATGCTGTTAAG
Downstream 100 bases:
>100_bases TTTAATGAAGGATAAATTATCCATGAAACATGGTGAATTAATCAGAGAACAGACCTATGAATTTCTAAATAAATCGCCTA ACCATATTCTCCTATGTGAA
Product: pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, subunit alpha
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR; TPP-dependent acetoin dehydrogenase E1 subunit alpha [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRAFQLAIADEYHNQKMRCPVHLSIGQEYWLPLVKKFFQKTDRCFSSHRSHSMYLALACDPESLIAELHGSAFGSLQGLG GSMHLKELDSGLEASIPIVGSSIALGVGSALSAKHSKNDVLTISYFGDGACEEGIFHECLNLAALYKLPILFICENNSYS CNTHYSNRQTANDMTRFPLSHGMTNFKINNFDPYLFIESTMEKCFSLARDRPVFLEISSYRLYEHCGHLIDLDRGDRTYD EYLYYQRIDPVNQMLSIYPNLKNDETIWKKYYIDLIRKYE
Sequences:
>Translated_280_residues MRAFQLAIADEYHNQKMRCPVHLSIGQEYWLPLVKKFFQKTDRCFSSHRSHSMYLALACDPESLIAELHGSAFGSLQGLG GSMHLKELDSGLEASIPIVGSSIALGVGSALSAKHSKNDVLTISYFGDGACEEGIFHECLNLAALYKLPILFICENNSYS CNTHYSNRQTANDMTRFPLSHGMTNFKINNFDPYLFIESTMEKCFSLARDRPVFLEISSYRLYEHCGHLIDLDRGDRTYD EYLYYQRIDPVNQMLSIYPNLKNDETIWKKYYIDLIRKYE >Mature_280_residues MRAFQLAIADEYHNQKMRCPVHLSIGQEYWLPLVKKFFQKTDRCFSSHRSHSMYLALACDPESLIAELHGSAFGSLQGLG GSMHLKELDSGLEASIPIVGSSIALGVGSALSAKHSKNDVLTISYFGDGACEEGIFHECLNLAALYKLPILFICENNSYS CNTHYSNRQTANDMTRFPLSHGMTNFKINNFDPYLFIESTMEKCFSLARDRPVFLEISSYRLYEHCGHLIDLDRGDRTYD EYLYYQRIDPVNQMLSIYPNLKNDETIWKKYYIDLIRKYE
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=219, Percent_Identity=31.5068493150685, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI4505685, Length=219, Percent_Identity=29.6803652968037, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI291084742, Length=219, Percent_Identity=29.6803652968037, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI291084744, Length=227, Percent_Identity=29.5154185022026, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI258645172, Length=178, Percent_Identity=28.6516853932584, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI11386135, Length=178, Percent_Identity=27.5280898876405, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32564172, Length=255, Percent_Identity=27.843137254902, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17536047, Length=255, Percent_Identity=27.843137254902, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI86563357, Length=190, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI86563355, Length=190, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321026, Length=254, Percent_Identity=30.7086614173228, Blast_Score=112, Evalue=5e-26, Organism=Drosophila melanogaster, GI24639746, Length=262, Percent_Identity=29.0076335877863, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24639744, Length=262, Percent_Identity=29.0076335877863, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI28571106, Length=262, Percent_Identity=29.0076335877863, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24639740, Length=262, Percent_Identity=29.0076335877863, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24639748, Length=226, Percent_Identity=29.2035398230088, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI21355903, Length=186, Percent_Identity=26.3440860215054, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 32156; Mature: 32156
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFQLAIADEYHNQKMRCPVHLSIGQEYWLPLVKKFFQKTDRCFSSHRSHSMYLALACD CCEEEEEEHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC PESLIAELHGSAFGSLQGLGGSMHLKELDSGLEASIPIVGSSIALGVGSALSAKHSKNDV HHHHHHHHHCCHHHHHHCCCCCCCHHHHCCCCCCCCCEECCHHHHCCCCHHHCCCCCCCE LTISYFGDGACEEGIFHECLNLAALYKLPILFICENNSYSCNTHYSNRQTANDMTRFPLS EEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCHHHHHHCHHH HGMTNFKINNFDPYLFIESTMEKCFSLARDRPVFLEISSYRLYEHCGHLIDLDRGDRTYD CCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEECCCCCCCHH EYLYYQRIDPVNQMLSIYPNLKNDETIWKKYYIDLIRKYE HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRAFQLAIADEYHNQKMRCPVHLSIGQEYWLPLVKKFFQKTDRCFSSHRSHSMYLALACD CCEEEEEEHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC PESLIAELHGSAFGSLQGLGGSMHLKELDSGLEASIPIVGSSIALGVGSALSAKHSKNDV HHHHHHHHHCCHHHHHHCCCCCCCHHHHCCCCCCCCCEECCHHHHCCCCHHHCCCCCCCE LTISYFGDGACEEGIFHECLNLAALYKLPILFICENNSYSCNTHYSNRQTANDMTRFPLS EEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCCHHHHHHCHHH HGMTNFKINNFDPYLFIESTMEKCFSLARDRPVFLEISSYRLYEHCGHLIDLDRGDRTYD CCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEECCCCCCCHH EYLYYQRIDPVNQMLSIYPNLKNDETIWKKYYIDLIRKYE HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969503; 10368162; 9384377 [H]