| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is gmhB [H]
Identifier: 124021810
GI number: 124021810
Start: 97134
End: 97796
Strand: Direct
Name: gmhB [H]
Synonym: P9303_00971
Alternate gene names: 124021810
Gene position: 97134-97796 (Clockwise)
Preceding gene: 124021809
Following gene: 124021811
Centisome position: 3.62
GC content: 33.79
Gene sequence:
>663_bases ATGAACAGACACATAATACATACTATAAAAAGTAGTAGAGAAATACTAGGAATAAATAACAAGTGTTTATTCCTAGACAG GGATGGCGTTATTATAAAAGATAAAAACTACATCAGCTCTCCTTTAGAAGTAGAGCTGGAGAAAGGTGCAAAGTATTTGA TTAACCTAGCAAAGAAAAATCATTATCTTGTGGTCATTATTACTAACCAATCTGGGATCTCTCGAGGTTATTTTAATTGG AATCAATACGAGGAAGTTACTAAAGAAATGATTAAGCAGCTTGGTGGTGAGATGATGGTTGATGGTATTTATGCAAATGG AATTTATCCAGATGCGTCTACAAAAGCCGATAGCTGGAGAAAACCTGGGATTGGTATGATTATTCAAGCAAAGAACGACT TCAATATAGAATTAAAAGACTCTATTTTAATTGGTGATAGATTGAGTGATATTCTTTCAGGTTTACGTGCTGGATTAGGA CATGTCATACATGTAGAGACTGGCCATGGGCATAAAGAAAGATCCAAAGTGGAAAAATATTTAGTTCGAGAAACACCAAA TATGATATGTTTCGAGGAAGATGGAACAAAAACAAACTTTACGAGGTTAACAAGTCTAGAGGAATTAGACAAGGAGGATA TAAATATATTTTCCAGTACTTAA
Upstream 100 bases:
>100_bases GAGCGTGTAAAAACTGGTATTGATAAATTTGAGTATAAAAAATTAAAAAAATCTAAAATGATAAAGGCTAGGCGGATATA AACTTATAGTTATTTCAAAA
Downstream 100 bases:
>100_bases ATTGATGGCAATATGTCAGAATTATCCATATACTTGGTGAGGCGTTAGATAGATTCTGAAATTCAATTGGATGTATAGAA TCTTAAATACAGGAGTATGG
Product: phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNRHIIHTIKSSREILGINNKCLFLDRDGVIIKDKNYISSPLEVELEKGAKYLINLAKKNHYLVVIITNQSGISRGYFNW NQYEEVTKEMIKQLGGEMMVDGIYANGIYPDASTKADSWRKPGIGMIIQAKNDFNIELKDSILIGDRLSDILSGLRAGLG HVIHVETGHGHKERSKVEKYLVRETPNMICFEEDGTKTNFTRLTSLEELDKEDINIFSST
Sequences:
>Translated_220_residues MNRHIIHTIKSSREILGINNKCLFLDRDGVIIKDKNYISSPLEVELEKGAKYLINLAKKNHYLVVIITNQSGISRGYFNW NQYEEVTKEMIKQLGGEMMVDGIYANGIYPDASTKADSWRKPGIGMIIQAKNDFNIELKDSILIGDRLSDILSGLRAGLG HVIHVETGHGHKERSKVEKYLVRETPNMICFEEDGTKTNFTRLTSLEELDKEDINIFSST >Mature_220_residues MNRHIIHTIKSSREILGINNKCLFLDRDGVIIKDKNYISSPLEVELEKGAKYLINLAKKNHYLVVIITNQSGISRGYFNW NQYEEVTKEMIKQLGGEMMVDGIYANGIYPDASTKADSWRKPGIGMIIQAKNDFNIELKDSILIGDRLSDILSGLRAGLG HVIHVETGHGHKERSKVEKYLVRETPNMICFEEDGTKTNFTRLTSLEELDKEDINIFSST
Specific function: Converts the D-glycero-alpha-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-alpha-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=152, Percent_Identity=33.5526315789474, Blast_Score=84, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 24989; Mature: 24989
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRHIIHTIKSSREILGINNKCLFLDRDGVIIKDKNYISSPLEVELEKGAKYLINLAKKN CCCEEEEEECCCCEEEECCCEEEEEECCCEEEECCCCCCCCCEEEECCCCCEEHHHHCCC HYLVVIITNQSGISRGYFNWNQYEEVTKEMIKQLGGEMMVDGIYANGIYPDASTKADSWR CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCC KPGIGMIIQAKNDFNIELKDSILIGDRLSDILSGLRAGLGHVIHVETGHGHKERSKVEKY CCCCEEEEEECCCCCEEEECCEEECHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH LVRETPNMICFEEDGTKTNFTRLTSLEELDKEDINIFSST HHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MNRHIIHTIKSSREILGINNKCLFLDRDGVIIKDKNYISSPLEVELEKGAKYLINLAKKN CCCEEEEEECCCCEEEECCCEEEEEECCCEEEECCCCCCCCCEEEECCCCCEEHHHHCCC HYLVVIITNQSGISRGYFNWNQYEEVTKEMIKQLGGEMMVDGIYANGIYPDASTKADSWR CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCC KPGIGMIIQAKNDFNIELKDSILIGDRLSDILSGLRAGLGHVIHVETGHGHKERSKVEKY CCCCEEEEEECCCCCEEEECCEEECHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH LVRETPNMICFEEDGTKTNFTRLTSLEELDKEDINIFSST HHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11279237; 12101286 [H]