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The map label for this gene is holA

Identifier: 124021798

GI number: 124021798

Start: 82164

End: 83174

Strand: Reverse

Name: holA

Synonym: P9303_00831

Alternate gene names: NA

Gene position: 83174-82164 (Counterclockwise)

Preceding gene: 124021800

Following gene: 124021797

Centisome position: 3.1

GC content: 56.87

Gene sequence:

>1011_bases
ATGCCGATCCATCTCTTCTGGGGCGATGATGCCGCCGCCCGAGACCACGCCATCGAGACTCTGATCGGCGATGTTGTCGA
TCAAGCATGGAACAGCATCAACCTCAGCCGCCTCGATGGAGCTGATGCTGGGCAAGCCAGCCAAGCCTTGACAGAAGCAC
GCACACCACCCTTCGGAAGTGGCGGACGACTGGTGCTGTTACAGCGCAGTCCGTTCTGCAACGCTTGCCCGAGCGAACTG
GCCAATCGTTTCGAAGACGTGCTGGATCTGATTCCAGAAACCAGCCACCTGGTGCTATGCAACCCCAACAAACCAGACGG
CCGGCTGCGAACAACGAAGGCCTTACAAAAGCTTGTGAAGTTGAAGCAAGCCAGCGAAAAAAGCTTTCTCCTGCCGGCGA
TCTGGGATGGTGCCGGTCAGCAGGAGCTGGTGGAACGCACCGCCCGCGACTTAGGTCTGCAGCTGGAGCCTGAAGCCACT
ACAGCGCTGGTGGAAGCCATCGGCAATGACAGTACGCGACTCAACGCAGAGCTGCAAAAACTGGCTCTCCATGCCGAAAT
TCGCCAAGAAAACGCAACTGCTAATCAATCACCAACTTTGATTAAAGCCGAAAACGTAGCCGCGCTGATTGAGGGAATGG
CCACCAATGCACTACAGGTTGGCGATTCACTCTTGGCAGGCCATGCCGGAGAAGCGATCGCCCGTCTTGATGCACTACTG
GATGCCGGTGAGCCAGCTCTTCGCATCGTGGCCACCTTGACAGGCCAAATCAGAGGTTGGCTTTGGGTGAGTTTGCTGGA
GCAGCAAGGGGAACGAGATGTGAACGTGATTGCCAAAGCAGCAGGCATTGGCAACCCCAAGCGGATCTACGTAATGCGCA
AACAACTACAGGGCCGGCCACCGCAGCGATTCCTCACCCTGCTGAGTCGCTTGCTTGAAGTAGAAGCTGCCCTCAAGCGA
GGTGCAATCCCTACTGATGCCTTCCGCGACGGGTTACTCAGCACTCCCTAA

Upstream 100 bases:

>100_bases
CTTTCCGTGAAGATCGGATGATCAAGCGACTTCACGTTTCTGCCTTAAGCCCGATAGACATCAAGCATCATCAGATAACG
ATCTTCGGTCTGCCGCTGCA

Downstream 100 bases:

>100_bases
TCCAGTGACGACACGCTGAAATAATCAGAACGTGTGTCAAAGGCATGGATGGCGTTGCTGGTGCAAAAATTCGGCGGGTC
ATCCGTCGGCAACGTCGAGC

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPIHLFWGDDAAARDHAIETLIGDVVDQAWNSINLSRLDGADAGQASQALTEARTPPFGSGGRLVLLQRSPFCNACPSEL
ANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVKLKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEAT
TALVEAIGNDSTRLNAELQKLALHAEIRQENATANQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL
DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLTLLSRLLEVEAALKR
GAIPTDAFRDGLLSTP

Sequences:

>Translated_336_residues
MPIHLFWGDDAAARDHAIETLIGDVVDQAWNSINLSRLDGADAGQASQALTEARTPPFGSGGRLVLLQRSPFCNACPSEL
ANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVKLKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEAT
TALVEAIGNDSTRLNAELQKLALHAEIRQENATANQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL
DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLTLLSRLLEVEAALKR
GAIPTDAFRDGLLSTP
>Mature_335_residues
PIHLFWGDDAAARDHAIETLIGDVVDQAWNSINLSRLDGADAGQASQALTEARTPPFGSGGRLVLLQRSPFCNACPSELA
NRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVKLKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEATT
ALVEAIGNDSTRLNAELQKLALHAEIRQENATANQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALLD
AGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLTLLSRLLEVEAALKRG
AIPTDAFRDGLLSTP

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 36291; Mature: 36160

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIHLFWGDDAAARDHAIETLIGDVVDQAWNSINLSRLDGADAGQASQALTEARTPPFGS
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCCCCC
GGRLVLLQRSPFCNACPSELANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVK
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
LKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEATTALVEAIGNDSTRLNAELQK
HHHHCCCCEECHHHHCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCHHHHHHHHH
LALHAEIRQENATANQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEHEEHHHHCCCC
PQRFLTLLSRLLEVEAALKRGAIPTDAFRDGLLSTP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
PIHLFWGDDAAARDHAIETLIGDVVDQAWNSINLSRLDGADAGQASQALTEARTPPFGS
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCCCCC
GGRLVLLQRSPFCNACPSELANRFEDVLDLIPETSHLVLCNPNKPDGRLRTTKALQKLVK
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
LKQASEKSFLLPAIWDGAGQQELVERTARDLGLQLEPEATTALVEAIGNDSTRLNAELQK
HHHHCCCCEECHHHHCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCHHHHHHHHH
LALHAEIRQENATANQSPTLIKAENVAALIEGMATNALQVGDSLLAGHAGEAIARLDALL
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DAGEPALRIVATLTGQIRGWLWVSLLEQQGERDVNVIAKAAGIGNPKRIYVMRKQLQGRP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEHEEHHHHCCCC
PQRFLTLLSRLLEVEAALKRGAIPTDAFRDGLLSTP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA