| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is cyaD [H]
Identifier: 124021800
GI number: 124021800
Start: 83858
End: 85033
Strand: Reverse
Name: cyaD [H]
Synonym: P9303_00851
Alternate gene names: 124021800
Gene position: 85033-83858 (Counterclockwise)
Preceding gene: 124021801
Following gene: 124021798
Centisome position: 3.17
GC content: 49.23
Gene sequence:
>1176_bases ATGAACAACAAGCCCAACCCCGTTGGCGGACTGATCCGCAGAGCTCAGAACCAACTAGAGCAGAAAGTGAGCTCTGTATC ACACGATGAAAGCGTGCTCCAGCAAAGCCGCTTTTGGATGCGTGCCGTGACCTGGAGCCTGATCGGCACGACTGCCTTTG CAGTGGGCTGGTTGGCCATCGCCCGCACGGAAGAAATCGTTGTCGCACAAGGCAAACTTGAACCATTAGGCGATGTCAAA GAGATTCAAATCCCAGTGGGAGGAGTCGCTAGGGACATCCTTATCAAAGGAGGTGATCGCGTCAGTAAAGGTCAGATTCT GATCCAGCTCGACACTGAAACATCCTCAGAACAAGTGAACTCCTTAGAAGCTCAGTTCACAAAAAAACAGCAACAACTAA AGCTCAAACTTGAAGAACAACAGGGAACACTAGCTCTCAGCCGAGAACAAGTCGCCACAACCAGAGATAATCTGGCCCTT GAACAACAAATCCTTAGCCGGTTTGAATTTCTTAGCGCACAGGGTGCTTCCTCTGAGCTTCAGTATTTACAACAACGCAA CAAGGTAAGAGAATTGCGTGGAAGGGTCACAAAAGAGAAATTGGATGGCGCTCGCCAACAATCAATCCTCAATCAAGAAA TTGAACAGCTCAATGCCCAATTAGCCCAGCTTAAGGCTCAACTCACTGAAGCAAAAGTAACGCTGAAATACCAGTCTTTG CGTTCTCCAGTGGATGGGGTGGTTTTTGATCTCAAGCCAACCACGCCTGGATTTGTCGCCCAGTCAAGTGAACCGGTGCT CAAGATCGTGCCCTTTAACAACCTGGAAGCCGATGTAGAAATCCCCAGCAACAAAATTGGTTTCGTTCGCGAAGGCATGT CCGTTGACATCAGTATTGATTCCTTCCCCGCTACGGACTTCGGGGTACTAGAAGGCAAGGTGACCTCGATTGGCTCCGAC GCACTTCCGCCCGATCAACAAAAACAACGACAGGAATACCGCTTCCCAGCCACCATTCAGCTCGACAGCCAACAACTCAA ACTCAAGAACGGCACAACGCTTCCCTTGCAAGTAGGAATGTCGCTCACTGCAAATATCAAACTGCGCAGTGTGAGCTATT TACAACTACTGCTTGGCCAGTTCCAGAGTAAAACCGATTCACTTAGGCAACTGTGA
Upstream 100 bases:
>100_bases ATGCATCAAGGGGCAATCGTGGAAATGGGCACTCACGAAGCCTTGATGGAAAAACGAGGTCGGTACTACGCCCTCTATCG ACAGCAGGAGTCGAGCTGAA
Downstream 100 bases:
>100_bases CGCCCGCAACAGAGCATTGACCGTCGCTGCAACCAGACCAGCCCCACCACGACTGCCCTCAAGGCGAATCTGAGCCAGTC CGCTAACAACTAACCGCCGC
Product: transporter component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVK EIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVNSLEAQFTKKQQQLKLKLEEQQGTLALSREQVATTRDNLAL EQQILSRFEFLSAQGASSELQYLQQRNKVRELRGRVTKEKLDGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSL RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFNNLEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD ALPPDQQKQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVSYLQLLLGQFQSKTDSLRQL
Sequences:
>Translated_391_residues MNNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVK EIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVNSLEAQFTKKQQQLKLKLEEQQGTLALSREQVATTRDNLAL EQQILSRFEFLSAQGASSELQYLQQRNKVRELRGRVTKEKLDGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSL RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFNNLEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD ALPPDQQKQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVSYLQLLLGQFQSKTDSLRQL >Mature_391_residues MNNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVK EIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVNSLEAQFTKKQQQLKLKLEEQQGTLALSREQVATTRDNLAL EQQILSRFEFLSAQGASSELQYLQQRNKVRELRGRVTKEKLDGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSL RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFNNLEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD ALPPDQQKQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVSYLQLLLGQFQSKTDSLRQL
Specific function: CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 43404; Mature: 43404
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAI CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTEEIVVAQGKLEPLGDVKEIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVN HCCCEEEEECCCCCCCCCCEEEEECCCCCEEEHEEECCCCCCCCEEEEEECCCCCHHHHH SLEAQFTKKQQQLKLKLEEQQGTLALSREQVATTRDNLALEQQILSRFEFLSAQGASSEL HHHHHHHHHHHHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QYLQQRNKVRELRGRVTKEKLDGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHH RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFNNLEADVEIPSNKIGFVREGMSVDISID CCCCCCEEEEECCCCCCCEECCCCCEEEEEECCCCCEEEECCCCCCCCEECCCEEEEEEC SFPATDFGVLEGKVTSIGSDALPPDQQKQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGM CCCCCCCCEECCEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCEEEECCCCEEEEEECC SLTANIKLRSVSYLQLLLGQFQSKTDSLRQL EEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNKPNPVGGLIRRAQNQLEQKVSSVSHDESVLQQSRFWMRAVTWSLIGTTAFAVGWLAI CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTEEIVVAQGKLEPLGDVKEIQIPVGGVARDILIKGGDRVSKGQILIQLDTETSSEQVN HCCCEEEEECCCCCCCCCCEEEEECCCCCEEEHEEECCCCCCCCEEEEEECCCCCHHHHH SLEAQFTKKQQQLKLKLEEQQGTLALSREQVATTRDNLALEQQILSRFEFLSAQGASSEL HHHHHHHHHHHHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QYLQQRNKVRELRGRVTKEKLDGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHH RSPVDGVVFDLKPTTPGFVAQSSEPVLKIVPFNNLEADVEIPSNKIGFVREGMSVDISID CCCCCCEEEEECCCCCCCEECCCCCEEEEEECCCCCEEEECCCCCCCCEECCCEEEEEEC SFPATDFGVLEGKVTSIGSDALPPDQQKQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGM CCCCCCCCEECCEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCEEEECCCCEEEEEECC SLTANIKLRSVSYLQLLLGQFQSKTDSLRQL EEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]