| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021754
Identifier: 124021754
GI number: 124021754
Start: 40656
End: 41171
Strand: Reverse
Name: 124021754
Synonym: P9303_00391
Alternate gene names: NA
Gene position: 41171-40656 (Counterclockwise)
Preceding gene: 124021758
Following gene: 124021753
Centisome position: 1.53
GC content: 54.84
Gene sequence:
>516_bases ATGCCTTCTCTGGCAACGTTGCTGATTTATCTCATGGCAGGAACAGCATTGGGTCTGCTGACATTGCGCACTGGCATTCC AGCAGCACCCCTTGCAGGTGCTCTTTTAGGTGCAGGGCTCGTGAGCATGAGCGGTCGCCTTGATGTTGCTGAATGGCCCT CAGGAACACGCACTGCAATTGAAATCGCCATCGGCACGGTGATCGGCACCGGCCTGACCAAAAGCTCCCTAGGGGAGCTG CAAAGCCTCTGGAAACCAGCCCTACTGATCACTCTGACCCTTGTACTTACTGGGATCGTGATCGGTCTTTGGAGCAGTCG ATTACTAGGTATTGACCCTGTGGTTTCACTCCTCGGCGCTGCCCCAGGAGGCATCAGTGGCATGAGTCTGGTAGGTGCGG AATTCGGCGTCGGTGCTGCAGTCGCCACCCTGCATGCTGTGAGATTAATCACCGTACTTTTGGTACTACCCCTTCTGGTG AAGCTATTGGCCCCATTAGGACTCATTGATTCCTGA
Upstream 100 bases:
>100_bases CCCGATGACAACACATGAGGAATAAAGGCTCAAGTCATTAGGCAGATGGTGAGGAGAATCATTTGCGCTCAAAGTATCTG TACTTTTTCAAATCGATCCC
Downstream 100 bases:
>100_bases TTAAACCTGGACAGGACTGTTTCAATCGATAAGTTGATCAATACTGTGTTGACTTGCAAGCGATGAATCGAAATCGAAAT CGAGTTGCCCTATCACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMSGRLDVAEWPSGTRTAIEIAIGTVIGTGLTKSSLGEL QSLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGAAPGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLV KLLAPLGLIDS
Sequences:
>Translated_171_residues MPSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMSGRLDVAEWPSGTRTAIEIAIGTVIGTGLTKSSLGEL QSLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGAAPGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLV KLLAPLGLIDS >Mature_170_residues PSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMSGRLDVAEWPSGTRTAIEIAIGTVIGTGLTKSSLGELQ SLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGAAPGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLVK LLAPLGLIDS
Specific function: Unknown
COG id: COG3180
COG function: function code R; Putative ammonia monooxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17132; Mature: 17001
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMSGRLDVAEWPSGTRTAI CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHH EIAIGTVIGTGLTKSSLGELQSLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC APGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLVKLLAPLGLIDS CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSLATLLIYLMAGTALGLLTLRTGIPAAPLAGALLGAGLVSMSGRLDVAEWPSGTRTAI CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHH EIAIGTVIGTGLTKSSLGELQSLWKPALLITLTLVLTGIVIGLWSSRLLGIDPVVSLLGA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC APGGISGMSLVGAEFGVGAAVATLHAVRLITVLLVLPLLVKLLAPLGLIDS CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA