| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021749
Identifier: 124021749
GI number: 124021749
Start: 36453
End: 37373
Strand: Reverse
Name: 124021749
Synonym: P9303_00341
Alternate gene names: NA
Gene position: 37373-36453 (Counterclockwise)
Preceding gene: 124021751
Following gene: 124021747
Centisome position: 1.39
GC content: 53.53
Gene sequence:
>921_bases ATGCTCACAGAACTTGTCAAGCAGAGTCCGCCTCTCCCCACCGGCTCAAAGTTGCTGGTTCTCGGTGGAGGATTCAGTGG CCAGCATGTAGTGGCTCTGGCGAGAGCACTTGGCAGTACTGCTATCTGCAGCCGCAGAGACATCAACAGCCCAGGCGCAG ACATGGCATTTGATAGTGCCACCAAGCTGTTGCCAACCACGAAAGTTCTAGAAGGAGTCACTCATTTACTCAGCTGCATA CCGCCAGCAGCCGATGGGAAAGATCCAGTACTGACATGCTTGGGCGACCAACTCAAAGCGTTGCCATTGCAATGGGTTGG CTACCTCTCCACCACAGGGGTTTACGGAGATCGCCAAGGACGCTGGGTCACAGAAATCGATCATCCTCAGCCTCAGCAAG CACGGAGCAAACGAAGATTGGCCTGTGAAGAGGCCTGGCAAGCTTCGGGATTACCCCTGCAGATTCTGCGACTGCCTGGC ATCTACGGACCAGGCCGCTCAGTGCTTAAAAGCGTCAACACAGGTCAAAGCAGAATGATCCACAAGCCCAACCAGGTGTT TTCAAGAATTCATGTCGATGACATCGCAGGAGCCATCCTGCATCTAATCCAATGCGCTGCTGATGGACAGCGACCCATCG TGATCAACGTCACCGATGACATGCCAACAGCTTATACAGACGTACTCGGGTTCGCCGCCCAACTACTTGGAAAGTCCCTA CCCGAAATTGAGCCGTTTGCAGTTGCCGCTGCACAGATGAATCCCATGGCTCTCTCCTTCTGGCAAGAGAATCGCAGGGT CAGCAATCAGCTCCTATGCCGCGAGCTTGGCTATTCCCTGATGCATCCCAACTATCACTCCGGCCTTAGAGACTGTTATC TGGCAGAAGGTTTCAAGGTCTCACAGACGAATTTTCCTTAG
Upstream 100 bases:
>100_bases CTTGGACATGCCCGACGCGGCAGCATGGACACTGAAATCGCGGAAGCACGCAAATAGGAGCTCGCCATGACCAAACCTGG AATATAATACATTTGTACTC
Downstream 100 bases:
>100_bases TTGTTGACCGTTCCCGATCCGAACCACCAAGAATGAACTCGTTCCAATTGAAGGGCTTCTCTGGATCGATAAATGTCAAC CCGGCATCGCGCAAAAACTG
Product: nucleoside-diphosphate-sugar epimerase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; ActC Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; Phosphate ABC Transporter Permease; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; Actc Protein
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLTELVKQSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPGADMAFDSATKLLPTTKVLEGVTHLLSCI PPAADGKDPVLTCLGDQLKALPLQWVGYLSTTGVYGDRQGRWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPG IYGPGRSVLKSVNTGQSRMIHKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDMPTAYTDVLGFAAQLLGKSL PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYHSGLRDCYLAEGFKVSQTNFP
Sequences:
>Translated_306_residues MLTELVKQSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPGADMAFDSATKLLPTTKVLEGVTHLLSCI PPAADGKDPVLTCLGDQLKALPLQWVGYLSTTGVYGDRQGRWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPG IYGPGRSVLKSVNTGQSRMIHKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDMPTAYTDVLGFAAQLLGKSL PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYHSGLRDCYLAEGFKVSQTNFP >Mature_306_residues MLTELVKQSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPGADMAFDSATKLLPTTKVLEGVTHLLSCI PPAADGKDPVLTCLGDQLKALPLQWVGYLSTTGVYGDRQGRWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPG IYGPGRSVLKSVNTGQSRMIHKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDMPTAYTDVLGFAAQLLGKSL PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYHSGLRDCYLAEGFKVSQTNFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33217; Mature: 33217
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTELVKQSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPGADMAFDSA CCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHH TKLLPTTKVLEGVTHLLSCIPPAADGKDPVLTCLGDQLKALPLQWVGYLSTTGVYGDRQG HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC RWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPGIYGPGRSVLKSVNTGQSRMI CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHC HKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDMPTAYTDVLGFAAQLLGKSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYHSGLRDCYLAEGFKV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCEEE SQTNFP CCCCCC >Mature Secondary Structure MLTELVKQSPPLPTGSKLLVLGGGFSGQHVVALARALGSTAICSRRDINSPGADMAFDSA CCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHH TKLLPTTKVLEGVTHLLSCIPPAADGKDPVLTCLGDQLKALPLQWVGYLSTTGVYGDRQG HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC RWVTEIDHPQPQQARSKRRLACEEAWQASGLPLQILRLPGIYGPGRSVLKSVNTGQSRMI CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHC HKPNQVFSRIHVDDIAGAILHLIQCAADGQRPIVINVTDDMPTAYTDVLGFAAQLLGKSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC PEIEPFAVAAAQMNPMALSFWQENRRVSNQLLCRELGYSLMHPNYHSGLRDCYLAEGFKV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHCCEEE SQTNFP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA