| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026890
Identifier: 124026890
GI number: 124026890
Start: 1845347
End: 1846459
Strand: Direct
Name: 124026890
Synonym: NATL1_21851
Alternate gene names: NA
Gene position: 1845347-1846459 (Clockwise)
Preceding gene: 124026887
Following gene: 124026892
Centisome position: 98.96
GC content: 29.92
Gene sequence:
>1113_bases ATGCAAATGAATAGCCAAAAAACAGAAAAAAAACACACCGAAATCTCAATTGTTGGAGGTGGGATAGCAGGAATTACAAC TGCCTTTCATTTAGGGAAAAAAGGTTATCAAATAAATTTAATCGACCCAACATTAAATTCAGAAATAAATAATTTAAATC CAAAAAATGGAACACAAGCTAGTTTGGGTGTTCTCATGGGAAATATCTACAAAAGATCAAAAGGAAGAGCTTTTTTACTA AGAAAAAAAAGTATGAAATTATGGAAAGAATGGCTTACACAAATAAACTATTCTGAGACAGATTTGATTCTTGAAAAACC ATTAATTAAATTAGCAAGTTCAGACAAAGAGTATCAATCAATGATTGAATTAAGTCATAATAAAAAAACTTATGGAATTG AACTTTTAGATCAAAATTCTTTAGATTTCTGGAATTCTATATTTGAGACAAGATTAATAGGGGGATTAATATCTCATGAA GATGGTCGATTAAATCCAATAAAGTTAATCAAGTCATTAATGGAAAGTCTTGATCAAATCAAGATAAATAAAATCGAGAA AAGTGTTATTAGAATAAGTAAAAATAATAATTTAAATGATAAAAGCTGGACTATTAATCTTGAAAATAATCAATCTATTA ATCAAGATTATATCATCATTTGTTCTGCATTAAATACTCAAAATTTATTAAAACCATTAGGTCATGAAATACTTTTAGAA CCAATATTAGGACAAGTTATTGAATTAGAATTAAAAAAAGAAACTCCGAATTGGAAAGAATGGCCTGCAATATTAAATTA TCAATCTATAAACTTTATACACCATGATCCCAATCGCATGCTTATAGGAGCAACTGTCGAAAAAGGAACTAAACCAAGCC AATTAGATAAACAAAAAATGCTGAACCTGAGAAACGGTTCTCCAAAATGGATGCTCAATGCAAAAGTCTGTCATGAATGG AGCGGAATAAGAGCTAGACCAACTAATGAAGCAGCTCCCTTATTAAAACAACTAGAACCAGGTCTATTAATTAATACAGG TCACTACAGAAATGGTGTTTTATTAGCTCCTGCTTGCGCCGAATGGATAGGACTTCAAATTGAGGGCCAATAA
Upstream 100 bases:
>100_bases TGCAAAATAACTGTTTTGATGCTCACTATAGCTATATCCTTAAACTATTCTCTTTTTTAGACCACACATTGAAAATTAAC AAGCAAATTTCATAGCATCT
Downstream 100 bases:
>100_bases ATATTAATTAATCTACTTATTTATTTTGTCTCTGTAAAGTCAGCATCAATAACATCATCTCCATCAACTTTACTGTCAGT ATTAGAATCTGCCGCGGCTT
Product: NAD binding site:D-amino acid oxidase
Products: NA
Alternate protein names: D-Amino Acid Oxidase; Glycine/D-Amino Acid Oxidases; FAD-Dependent Oxidoreductase; Glycine/D-Amino Acid Oxidase
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQASLGVLMGNIYKRSKGRAFLL RKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQSMIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHE DGRLNPIKLIKSLMESLDQIKINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKMLNLRNGSPKWMLNAKVCHEW SGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACAEWIGLQIEGQ
Sequences:
>Translated_370_residues MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQASLGVLMGNIYKRSKGRAFLL RKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQSMIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHE DGRLNPIKLIKSLMESLDQIKINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKMLNLRNGSPKWMLNAKVCHEW SGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACAEWIGLQIEGQ >Mature_370_residues MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQASLGVLMGNIYKRSKGRAFLL RKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQSMIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHE DGRLNPIKLIKSLMESLDQIKINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKMLNLRNGSPKWMLNAKVCHEW SGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACAEWIGLQIEGQ
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41970; Mature: 41970
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQA CCCCCCHHHHHCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHH SLGVLMGNIYKRSKGRAFLLRKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQS HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH MIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHEDGRLNPIKLIKSLMESLDQI HHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH KINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE HHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKM HHHHHHEEEEEECCCCCHHHCCHHCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHH LNLRNGSPKWMLNAKVCHEWSGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACA HHCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEECCCHH EWIGLQIEGQ HHCCCEEECC >Mature Secondary Structure MQMNSQKTEKKHTEISIVGGGIAGITTAFHLGKKGYQINLIDPTLNSEINNLNPKNGTQA CCCCCCHHHHHCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHH SLGVLMGNIYKRSKGRAFLLRKKSMKLWKEWLTQINYSETDLILEKPLIKLASSDKEYQS HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH MIELSHNKKTYGIELLDQNSLDFWNSIFETRLIGGLISHEDGRLNPIKLIKSLMESLDQI HHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH KINKIEKSVIRISKNNNLNDKSWTINLENNQSINQDYIIICSALNTQNLLKPLGHEILLE HHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH PILGQVIELELKKETPNWKEWPAILNYQSINFIHHDPNRMLIGATVEKGTKPSQLDKQKM HHHHHHEEEEEECCCCCHHHCCHHCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHH LNLRNGSPKWMLNAKVCHEWSGIRARPTNEAAPLLKQLEPGLLINTGHYRNGVLLAPACA HHCCCCCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEECCCHH EWIGLQIEGQ HHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA