| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is eriC [H]
Identifier: 124026887
GI number: 124026887
Start: 1841752
End: 1843110
Strand: Direct
Name: eriC [H]
Synonym: NATL1_21821
Alternate gene names: 124026887
Gene position: 1841752-1843110 (Clockwise)
Preceding gene: 124026886
Following gene: 124026890
Centisome position: 98.77
GC content: 36.5
Gene sequence:
>1359_bases ATGATCAAAAGTAAAAGTAAAAATCCAATACAAAAAAAATCAACTCAAAGCATAAAAAAACTTCTACAGAGGAAATGGCT AAATGTAATTCTTGCTCTCATACTTACAGGTTTAGGAGCAGCATTAACGGGAATATTATTTAAAACTGGGATTCATACAT TAGAAGATTATCGATCGAATCTTCTTGCATCTATGCCTAGATGGATAGTTTTACCAATACTAGGAGCATTGGGAGGCTTG ATTTCTGGATCGCTCATTCAAAATTTTGCCCCTGCAGCAAAAGGAGCGGGCGTAAGTCACATCATTGCTTTCCTTCGCCA TAAGCCAGTCCCCATGGGATTAAGAGTTGGAATAGTAAAACTGTTTGCTGGAATTATTGCTATTGGAAGTGGATTTCCGC TAGGCCCAGAAGGCCCGGCAGTACAAATGGGAGGATCAGTTGCCTGGAAAATGGCAAAATGGCTCAAAGCCCCTATTTCA TTTCGCAGAGTCATAGTTGCAGCAGGCGGAGGAGCTGGAATTGCAGCAATTTTTAGTGCGCCTATTGGAGGCTTTGTCTA TGCAATTGAAGAACTTCTAAATTCAGCCAGACCAGTAGTTCTCTTACTAGTAGTAGTAACAACTTTCTGGGCTGATAGTT GCGCTGATATTTTGCAAGCGATTGGACTAGATCAAAAAGCTGGTGGATTTGTTAATAATTTAGGTTTTCAATTAGAGAGA GCTTACACACCAGTAATCGAATTCTTTCCTATAGATTTTCTATACCTAATTTTTTTAGGAATTGTATTAGGATTATTAGC AGAAATGTATTGCCGATATGTTTTAAAAATGCAAGTTCTAGGAAATAAATGGTTTAAAAATAAAACCATTGAAAGAATGA GTTTATCGGGTTTATTGCTTGGTACTATGTATTCAATTATTCCGGAAAATTTTCACAATATCGAAGGATTACAAAAAATT ATTGTTAATGAAAGTAGCAATTTCACACTTGCAATAAGTATATTTTTTATTTTATTCTTTGCCTCTGGCCTTGCTGCTGC TTCAGGTGCACCAGGAGGTTTATTTTATCCAATGCTTACCTTGGGTGGAGCAATAGGTTTAGCAAGTGGTATTGGAGTCG AGACAATAACTGGGCATGTTCCAACAACCTATATTTTCGCAGGCATGGGGAGATTCGTAGCGGGATGCTCAAGAACGCCT CTAACAGCTATGTTTTTAGCTTTCGCATTAACTAAAAATCTTTTAATACTAAAACCACTCTTAATTACATGTATAGCTAG CTTTTTAACTGCCAGAATATTTAATGAACACTCAATTTATGAAAGACAAATTACAATTGAAGAAGGAGAATTAATTTAA
Upstream 100 bases:
>100_bases AGATACTTAAACTTTAATGAAATACCAAACTTTATCGAAGATGGTCGTGTAATAACAAAAGAAGAAGAGGCCTCTATTTT ACAAACCTAAATTGAATTAA
Downstream 100 bases:
>100_bases TACATTATTAAATTGTTTTAATGAATTATTGTAGCTCGTAGAATTATAGATCATACATCTAAGACCTATCAATAATATCC AACCTAAGATATTAATTCTG
Product: putative chloride channel
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MIKSKSKNPIQKKSTQSIKKLLQRKWLNVILALILTGLGAALTGILFKTGIHTLEDYRSNLLASMPRWIVLPILGALGGL ISGSLIQNFAPAAKGAGVSHIIAFLRHKPVPMGLRVGIVKLFAGIIAIGSGFPLGPEGPAVQMGGSVAWKMAKWLKAPIS FRRVIVAAGGGAGIAAIFSAPIGGFVYAIEELLNSARPVVLLLVVVTTFWADSCADILQAIGLDQKAGGFVNNLGFQLER AYTPVIEFFPIDFLYLIFLGIVLGLLAEMYCRYVLKMQVLGNKWFKNKTIERMSLSGLLLGTMYSIIPENFHNIEGLQKI IVNESSNFTLAISIFFILFFASGLAAASGAPGGLFYPMLTLGGAIGLASGIGVETITGHVPTTYIFAGMGRFVAGCSRTP LTAMFLAFALTKNLLILKPLLITCIASFLTARIFNEHSIYERQITIEEGELI
Sequences:
>Translated_452_residues MIKSKSKNPIQKKSTQSIKKLLQRKWLNVILALILTGLGAALTGILFKTGIHTLEDYRSNLLASMPRWIVLPILGALGGL ISGSLIQNFAPAAKGAGVSHIIAFLRHKPVPMGLRVGIVKLFAGIIAIGSGFPLGPEGPAVQMGGSVAWKMAKWLKAPIS FRRVIVAAGGGAGIAAIFSAPIGGFVYAIEELLNSARPVVLLLVVVTTFWADSCADILQAIGLDQKAGGFVNNLGFQLER AYTPVIEFFPIDFLYLIFLGIVLGLLAEMYCRYVLKMQVLGNKWFKNKTIERMSLSGLLLGTMYSIIPENFHNIEGLQKI IVNESSNFTLAISIFFILFFASGLAAASGAPGGLFYPMLTLGGAIGLASGIGVETITGHVPTTYIFAGMGRFVAGCSRTP LTAMFLAFALTKNLLILKPLLITCIASFLTARIFNEHSIYERQITIEEGELI >Mature_452_residues MIKSKSKNPIQKKSTQSIKKLLQRKWLNVILALILTGLGAALTGILFKTGIHTLEDYRSNLLASMPRWIVLPILGALGGL ISGSLIQNFAPAAKGAGVSHIIAFLRHKPVPMGLRVGIVKLFAGIIAIGSGFPLGPEGPAVQMGGSVAWKMAKWLKAPIS FRRVIVAAGGGAGIAAIFSAPIGGFVYAIEELLNSARPVVLLLVVVTTFWADSCADILQAIGLDQKAGGFVNNLGFQLER AYTPVIEFFPIDFLYLIFLGIVLGLLAEMYCRYVLKMQVLGNKWFKNKTIERMSLSGLLLGTMYSIIPENFHNIEGLQKI IVNESSNFTLAISIFFILFFASGLAAASGAPGGLFYPMLTLGGAIGLASGIGVETITGHVPTTYIFAGMGRFVAGCSRTP LTAMFLAFALTKNLLILKPLLITCIASFLTARIFNEHSIYERQITIEEGELI
Specific function: Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=416, Percent_Identity=28.125, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322500, Length=398, Percent_Identity=24.3718592964824, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 48579; Mature: 48579
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSKSKNPIQKKSTQSIKKLLQRKWLNVILALILTGLGAALTGILFKTGIHTLEDYRSN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLASMPRWIVLPILGALGGLISGSLIQNFAPAAKGAGVSHIIAFLRHKPVPMGLRVGIVK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH LFAGIIAIGSGFPLGPEGPAVQMGGSVAWKMAKWLKAPISFRRVIVAAGGGAGIAAIFSA HHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHC PIGGFVYAIEELLNSARPVVLLLVVVTTFWADSCADILQAIGLDQKAGGFVNNLGFQLER CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHH AYTPVIEFFPIDFLYLIFLGIVLGLLAEMYCRYVLKMQVLGNKWFKNKTIERMSLSGLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GTMYSIIPENFHNIEGLQKIIVNESSNFTLAISIFFILFFASGLAAASGAPGGLFYPMLT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGGAIGLASGIGVETITGHVPTTYIFAGMGRFVAGCSRTPLTAMFLAFALTKNLLILKPL HHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LITCIASFLTARIFNEHSIYERQITIEEGELI HHHHHHHHHHHHHHHCCHHHHEEEEECCCCCC >Mature Secondary Structure MIKSKSKNPIQKKSTQSIKKLLQRKWLNVILALILTGLGAALTGILFKTGIHTLEDYRSN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLASMPRWIVLPILGALGGLISGSLIQNFAPAAKGAGVSHIIAFLRHKPVPMGLRVGIVK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH LFAGIIAIGSGFPLGPEGPAVQMGGSVAWKMAKWLKAPISFRRVIVAAGGGAGIAAIFSA HHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHC PIGGFVYAIEELLNSARPVVLLLVVVTTFWADSCADILQAIGLDQKAGGFVNNLGFQLER CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHH AYTPVIEFFPIDFLYLIFLGIVLGLLAEMYCRYVLKMQVLGNKWFKNKTIERMSLSGLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GTMYSIIPENFHNIEGLQKIIVNESSNFTLAISIFFILFFASGLAAASGAPGGLFYPMLT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGGAIGLASGIGVETITGHVPTTYIFAGMGRFVAGCSRTPLTAMFLAFALTKNLLILKPL HHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LITCIASFLTARIFNEHSIYERQITIEEGELI HHHHHHHHHHHHHHHCCHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA