Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026854

Identifier: 124026854

GI number: 124026854

Start: 1806570

End: 1806992

Strand: Direct

Name: 124026854

Synonym: NATL1_21491

Alternate gene names: NA

Gene position: 1806570-1806992 (Clockwise)

Preceding gene: 124026851

Following gene: 124026855

Centisome position: 96.88

GC content: 35.22

Gene sequence:

>423_bases
ATGGATAGCGCTTTAATCAAAGCAATTGGTTTAAAAGCTCTCTTAGTTGGAGTTGGCGCACTTCTCCTGTTTTGGACTTT
TAATGCAATTAAACTCGTTGTAAGTGCTAGAGGGATTAATCCTCTTGTGAAAAAGTTTTTTGATCAGATTGCAGCTGGCC
GAATAGATGGGGCTTATAGACTTACGACAAAAGCTTATAAATCACACGTCAATAGACAAGACTTCATCAAATTTTTGGGT
AGCTTGCAATTAAATCGATATAGAAACTTAAAATCAGGGCGTCCAAGGATAGAAGACAATCAAATAATGCTCACACTAAG
CTTGAAATCAGAAGATAAGAAAAATGAAATGCCGCTGGATTTCACTTTTATTAAAATCAACGAAAATTGGCAAATTGATC
GTATTGCTAAAGCCAATACATAA

Upstream 100 bases:

>100_bases
AGCTTTATTATTTCGATAACATTCTGTCTGACTATCAATAACAAACAAGCTAACCTCATAGCTAATAAGTCAGACTCTTT
AATCAAAAGGAATTAAAAAC

Downstream 100 bases:

>100_bases
TTAATCAGAATGTGATAAGTGAATTCAAACTTTAATCAACATTTTGAACGTATAAAAGAGCTTAGAGCTTTACTCAATAA
AGCAAATTACTCCTACTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDSALIKAIGLKALLVGVGALLLFWTFNAIKLVVSARGINPLVKKFFDQIAAGRIDGAYRLTTKAYKSHVNRQDFIKFLG
SLQLNRYRNLKSGRPRIEDNQIMLTLSLKSEDKKNEMPLDFTFIKINENWQIDRIAKANT

Sequences:

>Translated_140_residues
MDSALIKAIGLKALLVGVGALLLFWTFNAIKLVVSARGINPLVKKFFDQIAAGRIDGAYRLTTKAYKSHVNRQDFIKFLG
SLQLNRYRNLKSGRPRIEDNQIMLTLSLKSEDKKNEMPLDFTFIKINENWQIDRIAKANT
>Mature_140_residues
MDSALIKAIGLKALLVGVGALLLFWTFNAIKLVVSARGINPLVKKFFDQIAAGRIDGAYRLTTKAYKSHVNRQDFIKFLG
SLQLNRYRNLKSGRPRIEDNQIMLTLSLKSEDKKNEMPLDFTFIKINENWQIDRIAKANT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15927; Mature: 15927

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSALIKAIGLKALLVGVGALLLFWTFNAIKLVVSARGINPLVKKFFDQIAAGRIDGAYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEE
LTTKAYKSHVNRQDFIKFLGSLQLNRYRNLKSGRPRIEDNQIMLTLSLKSEDKKNEMPLD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCE
FTFIKINENWQIDRIAKANT
EEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MDSALIKAIGLKALLVGVGALLLFWTFNAIKLVVSARGINPLVKKFFDQIAAGRIDGAYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEE
LTTKAYKSHVNRQDFIKFLGSLQLNRYRNLKSGRPRIEDNQIMLTLSLKSEDKKNEMPLD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCE
FTFIKINENWQIDRIAKANT
EEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA