| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026798
Identifier: 124026798
GI number: 124026798
Start: 1734806
End: 1735603
Strand: Reverse
Name: 124026798
Synonym: NATL1_20931
Alternate gene names: NA
Gene position: 1735603-1734806 (Counterclockwise)
Preceding gene: 124026799
Following gene: 124026793
Centisome position: 93.08
GC content: 27.44
Gene sequence:
>798_bases ATGACTATTATCGTAAAAATGTTGTTGGATAATTTTAAACTTGCTTTTAAAACTAGAAGAGCTTGGTGGTATACAGCTAG CTCTAGGTCAAGAGCTAGGTTTGCAAGAACTACATTAGGAAGTTTTTGGTTAGGTTTCTCAAATTTATTATCCATCGGAA CTTTAGGTATTGTCTATGGAACAGTCTTTTCAGTCGCAGATTTTAAGTCTTATTTTATATATTTAGGATTCGGATTAGTT ATTTGGAATACAATTAGTTCCTCAATTTCTAATTCTCCACATCTTTTTGCACATAATTCTTCTAACATAAAGAATATGAA CATTAAACCTATTTTTTATACTTTAGAAGAGTGGTCTTTTCAATTGCAAACATTTATTCAGTCTTTTATATTAGTATTTT TTGTATTTCTTTTCTTTCAATCTGAATTGATTGGTCATTTATTATTATATTCATGGATACCTCTTTTAAATTTATTTATT TTCATATACTGGTTTCCACTAATTGTTTGTATTATAAGTGTTCGCTTTACCGATATTGCTCAATTAGTTCCAATAGTTCT TCAGCTGGTTTTTCTAACTTCACCTATATTGTATAGAAAAGAAAGTTTAGGCTCCTTAGGTTGGATTACTAACTTAAATT TTATATATCATATTTTAGATCCTTTAAGAGCTAGCATAATTGAGGGAAATATAAACTATCAAGATTCAATGTTACTTTTA ATCTTTAATTTGATTGGACTTATTATTACAATTAGATTACTTGAGATTGAGAGTAAAAGTTTACCTTTTTTACTTTGA
Upstream 100 bases:
>100_bases GAACTTTTAAAACAGTTTTGTAATAGAGGTATTGTTTTTAGCCATGGATCAATTGTATATGATGGCCCTTTAGATGCTGC CTTGAATTATTATCATACCC
Downstream 100 bases:
>100_bases AGAGTGGATCACTAGTCTAGATATCTACCCACTTTCTTCTTCTATATTATCTCCAATAAACTCTATTATTTCTTTATCTC TTAAGTTCTGTGATTCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTIIVKMLLDNFKLAFKTRRAWWYTASSRSRARFARTTLGSFWLGFSNLLSIGTLGIVYGTVFSVADFKSYFIYLGFGLV IWNTISSSISNSPHLFAHNSSNIKNMNIKPIFYTLEEWSFQLQTFIQSFILVFFVFLFFQSELIGHLLLYSWIPLLNLFI FIYWFPLIVCIISVRFTDIAQLVPIVLQLVFLTSPILYRKESLGSLGWITNLNFIYHILDPLRASIIEGNINYQDSMLLL IFNLIGLIITIRLLEIESKSLPFLL
Sequences:
>Translated_265_residues MTIIVKMLLDNFKLAFKTRRAWWYTASSRSRARFARTTLGSFWLGFSNLLSIGTLGIVYGTVFSVADFKSYFIYLGFGLV IWNTISSSISNSPHLFAHNSSNIKNMNIKPIFYTLEEWSFQLQTFIQSFILVFFVFLFFQSELIGHLLLYSWIPLLNLFI FIYWFPLIVCIISVRFTDIAQLVPIVLQLVFLTSPILYRKESLGSLGWITNLNFIYHILDPLRASIIEGNINYQDSMLLL IFNLIGLIITIRLLEIESKSLPFLL >Mature_264_residues TIIVKMLLDNFKLAFKTRRAWWYTASSRSRARFARTTLGSFWLGFSNLLSIGTLGIVYGTVFSVADFKSYFIYLGFGLVI WNTISSSISNSPHLFAHNSSNIKNMNIKPIFYTLEEWSFQLQTFIQSFILVFFVFLFFQSELIGHLLLYSWIPLLNLFIF IYWFPLIVCIISVRFTDIAQLVPIVLQLVFLTSPILYRKESLGSLGWITNLNFIYHILDPLRASIIEGNINYQDSMLLLI FNLIGLIITIRLLEIESKSLPFLL
Specific function: Unknown
COG id: COG1682
COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30735; Mature: 30604
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIVKMLLDNFKLAFKTRRAWWYTASSRSRARFARTTLGSFWLGFSNLLSIGTLGIVYG CCEEHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFSVADFKSYFIYLGFGLVIWNTISSSISNSPHLFAHNSSNIKNMNIKPIFYTLEEWSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEHHHHHH QLQTFIQSFILVFFVFLFFQSELIGHLLLYSWIPLLNLFIFIYWFPLIVCIISVRFTDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVPIVLQLVFLTSPILYRKESLGSLGWITNLNFIYHILDPLRASIIEGNINYQDSMLLL HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IFNLIGLIITIRLLEIESKSLPFLL HHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure TIIVKMLLDNFKLAFKTRRAWWYTASSRSRARFARTTLGSFWLGFSNLLSIGTLGIVYG CEEHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFSVADFKSYFIYLGFGLVIWNTISSSISNSPHLFAHNSSNIKNMNIKPIFYTLEEWSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEHHHHHH QLQTFIQSFILVFFVFLFFQSELIGHLLLYSWIPLLNLFIFIYWFPLIVCIISVRFTDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLVPIVLQLVFLTSPILYRKESLGSLGWITNLNFIYHILDPLRASIIEGNINYQDSMLLL HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IFNLIGLIITIRLLEIESKSLPFLL HHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA