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The map label for this gene is farR [C]

Identifier: 124026796

GI number: 124026796

Start: 1733021

End: 1734010

Strand: Direct

Name: farR [C]

Synonym: NATL1_20911

Alternate gene names: 124026796

Gene position: 1733021-1734010 (Clockwise)

Preceding gene: 124026795

Following gene: 124026797

Centisome position: 92.94

GC content: 39.29

Gene sequence:

>990_bases
GTGAGATTCCACATACAACAGGACAGTGAAATCCCTGCATCAAACCAGTTATATAATCAAGTTTGTTTTGCTATTGCCGC
AAGACATTACCCACCTGGACATAGGTTGCCCAGTACCAGACAACTTGCAATGCAAACTGGTTTACATCGAAATACTATAA
GCAAAGTCTATAGACAGCTAGAAACAGATGGAGTTGTTGAAGCTATTGCTGGTTCAGGTATTTATGTTCGGGATCAGCAA
AAACAAAAAGATTTAAGAAGTAGCTCTCCTTCACTACGTAAAAAAGGCATCAAAGATATAGACCATGAGATCCGTAAAAG
TATTGATGAACTTTTAAATGCTGGATGCACCTTGCAGCAAACGAGAGAATTATTTACCCGTGAAATTGATTGGAGACTGA
GATGCGGAGCTCGCTTACTTGTTAGTACGCCTAGAGAAGATATTGGAGCATCATTACTAATTGCTGAAGAATTGGCTCCT
CATTTAGATGTCCCAGTAGAGGTTGTTCCAATGGAAGAACTAGAGAGTGTTTTAGAAAGCTCAAGCAAAGGAACAGTCGT
GACAAGTAGATATTTCTTACAGCCTTTAGAAGAATTAGCCAAGCGACACAAAGTAAGAGCCGTAGCTGTAGATTTAAACG
ATTTTAAACAAGAACTCAACATTCTAAAAAAGCTACGCACAGGAAGTTGTGTAGGGATAGTAAGTATCAGTCCAGGAATA
TTAAGGGCAGCAGAAGTTATTTCACACAGTATGCGCGGCAATGAACTCCTTTTAATGACAGCAAATCCCGATGTAGGAAG
TCGTCTTATTGCCTTATTAAGAGCAGCTAGTCACATAATTTGTGATAGCCCTAGCTTGCCTGTTATCGAACATACTTTGA
GACAAAATAGAACCCAATTCATGAGAATGCCACAAATTCATTGTGCGCAAAAGTATCTGAGCGACTCTACAATTGAAGAG
TTGAGTAAAGAAATTGGCCTTCTCGAATAA

Upstream 100 bases:

>100_bases
ATTAATTAAATCAAACAAAATTGTCATATGACAAACAAATAATTGTCACTAGCAATTCTTTTCATTAATCTAGCCCCAAT
CACACCTGGCATACAAACGC

Downstream 100 bases:

>100_bases
GCATTGCATTTGGAATCAATGTTTCGATCACTAAAGTCAGATTTCGCAATTATCAAAGAAAGGGATCCAGCTGCGAGAAG
CCTTTGGGAAATAATATTTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator GntR Family Protein; GntR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Repressor

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRFHIQQDSEIPASNQLYNQVCFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLETDGVVEAIAGSGIYVRDQQ
KQKDLRSSSPSLRKKGIKDIDHEIRKSIDELLNAGCTLQQTRELFTREIDWRLRCGARLLVSTPREDIGASLLIAEELAP
HLDVPVEVVPMEELESVLESSSKGTVVTSRYFLQPLEELAKRHKVRAVAVDLNDFKQELNILKKLRTGSCVGIVSISPGI
LRAAEVISHSMRGNELLLMTANPDVGSRLIALLRAASHIICDSPSLPVIEHTLRQNRTQFMRMPQIHCAQKYLSDSTIEE
LSKEIGLLE

Sequences:

>Translated_329_residues
MRFHIQQDSEIPASNQLYNQVCFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLETDGVVEAIAGSGIYVRDQQ
KQKDLRSSSPSLRKKGIKDIDHEIRKSIDELLNAGCTLQQTRELFTREIDWRLRCGARLLVSTPREDIGASLLIAEELAP
HLDVPVEVVPMEELESVLESSSKGTVVTSRYFLQPLEELAKRHKVRAVAVDLNDFKQELNILKKLRTGSCVGIVSISPGI
LRAAEVISHSMRGNELLLMTANPDVGSRLIALLRAASHIICDSPSLPVIEHTLRQNRTQFMRMPQIHCAQKYLSDSTIEE
LSKEIGLLE
>Mature_329_residues
MRFHIQQDSEIPASNQLYNQVCFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLETDGVVEAIAGSGIYVRDQQ
KQKDLRSSSPSLRKKGIKDIDHEIRKSIDELLNAGCTLQQTRELFTREIDWRLRCGARLLVSTPREDIGASLLIAEELAP
HLDVPVEVVPMEELESVLESSSKGTVVTSRYFLQPLEELAKRHKVRAVAVDLNDFKQELNILKKLRTGSCVGIVSISPGI
LRAAEVISHSMRGNELLLMTANPDVGSRLIALLRAASHIICDSPSLPVIEHTLRQNRTQFMRMPQIHCAQKYLSDSTIEE
LSKEIGLLE

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36952; Mature: 36952

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFHIQQDSEIPASNQLYNQVCFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQL
CEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
ETDGVVEAIAGSGIYVRDQQKQKDLRSSSPSLRKKGIKDIDHEIRKSIDELLNAGCTLQQ
HCCHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
TRELFTREIDWRLRCGARLLVSTPREDIGASLLIAEELAPHLDVPVEVVPMEELESVLES
HHHHHHHHCCHHHHCCCEEEEECCHHHHCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHC
SSKGTVVTSRYFLQPLEELAKRHKVRAVAVDLNDFKQELNILKKLRTGSCVGIVSISPGI
CCCCCEEHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCHH
LRAAEVISHSMRGNELLLMTANPDVGSRLIALLRAASHIICDSPSLPVIEHTLRQNRTQF
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
MRMPQIHCAQKYLSDSTIEELSKEIGLLE
HHCCHHHHHHHHHCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRFHIQQDSEIPASNQLYNQVCFAIAARHYPPGHRLPSTRQLAMQTGLHRNTISKVYRQL
CEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
ETDGVVEAIAGSGIYVRDQQKQKDLRSSSPSLRKKGIKDIDHEIRKSIDELLNAGCTLQQ
HCCHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
TRELFTREIDWRLRCGARLLVSTPREDIGASLLIAEELAPHLDVPVEVVPMEELESVLES
HHHHHHHHCCHHHHCCCEEEEECCHHHHCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHC
SSKGTVVTSRYFLQPLEELAKRHKVRAVAVDLNDFKQELNILKKLRTGSCVGIVSISPGI
CCCCCEEHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCHH
LRAAEVISHSMRGNELLLMTANPDVGSRLIALLRAASHIICDSPSLPVIEHTLRQNRTQF
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
MRMPQIHCAQKYLSDSTIEELSKEIGLLE
HHCCHHHHHHHHHCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA