| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026792
Identifier: 124026792
GI number: 124026792
Start: 1728893
End: 1729222
Strand: Reverse
Name: 124026792
Synonym: NATL1_20871
Alternate gene names: NA
Gene position: 1729222-1728893 (Counterclockwise)
Preceding gene: 124026793
Following gene: 124026791
Centisome position: 92.73
GC content: 34.55
Gene sequence:
>330_bases ATGAATTTAATTAGTACGCTTATTGTTTGGGCATGGCTTTTATGTATTGGTTTGGTAGCCCCTACTACATTACCTGCCGG GGGTGCTCAAGAATCAATTATTCAGCATAGAAGAAATAATATTGGATCACCAATAATTGCATTAAAAGAATTCAACCTGC ATACTTCAGCTTCTAATAATTCATCTACTTTAACTAGCGTTAAAGCAGGAACCCCAGTTAAAGTTATTAAAGTATGGGTT AGTAATGAGAGTAGAAATTGGTTGTTAGTTAGTGTTTTATGTCAGAACTTCGATCAGTTGTTTTATAGAAGAGGATGGGT GGAAATTTGA
Upstream 100 bases:
>100_bases ATCGGATATTTACAATTTTAATGGGAGATAAAGTCGCACCAAGAAGAGAATTTATTGAAACTCATAGTGTTGATTTGGAT CTAGCTACTTTAGATATTTG
Downstream 100 bases:
>100_bases GTAATATGATATATGTCTGAGATTTTATTTGTTTCTATTGGTGCAATTTTAGGGGCTAATATTCGATTTAAAATTCATCA TAAATTAGGAAACTTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNLISTLIVWAWLLCIGLVAPTTLPAGGAQESIIQHRRNNIGSPIIALKEFNLHTSASNNSSTLTSVKAGTPVKVIKVWV SNESRNWLLVSVLCQNFDQLFYRRGWVEI
Sequences:
>Translated_109_residues MNLISTLIVWAWLLCIGLVAPTTLPAGGAQESIIQHRRNNIGSPIIALKEFNLHTSASNNSSTLTSVKAGTPVKVIKVWV SNESRNWLLVSVLCQNFDQLFYRRGWVEI >Mature_109_residues MNLISTLIVWAWLLCIGLVAPTTLPAGGAQESIIQHRRNNIGSPIIALKEFNLHTSASNNSSTLTSVKAGTPVKVIKVWV SNESRNWLLVSVLCQNFDQLFYRRGWVEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12118; Mature: 12118
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLISTLIVWAWLLCIGLVAPTTLPAGGAQESIIQHRRNNIGSPIIALKEFNLHTSASNN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC SSTLTSVKAGTPVKVIKVWVSNESRNWLLVSVLCQNFDQLFYRRGWVEI CCCEEEECCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNLISTLIVWAWLLCIGLVAPTTLPAGGAQESIIQHRRNNIGSPIIALKEFNLHTSASNN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC SSTLTSVKAGTPVKVIKVWVSNESRNWLLVSVLCQNFDQLFYRRGWVEI CCCEEEECCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA