| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is kefB [H]
Identifier: 124026755
GI number: 124026755
Start: 1693553
End: 1694926
Strand: Reverse
Name: kefB [H]
Synonym: NATL1_20501
Alternate gene names: 124026755
Gene position: 1694926-1693553 (Counterclockwise)
Preceding gene: 124026757
Following gene: 124026754
Centisome position: 90.89
GC content: 41.05
Gene sequence:
>1374_bases ATGGTATTAACTCCTTTAGTCTCAGCACTTAATACTCATGATGTTGAGGTAGCGGAAACGCTGATAGGGGTCATTAATTT CTTGATGATCTTTGTTGCGGCAAGGACTTTGGCTGAAATCTTGGTTCGACTAAGTTTGCCTACAATAGTCGGTGAACTTC TTGCGGGAGTTTTAATTGGTGCCTCAGGATTACATCTTTTATTGCCGCCTAGTGCTCATGCTGAGTTGAATCAAGGTTTT GTTTCTGTTATTAGCACACTTGCTTCAGTACCCAAAGAAGCAGTCCCAGATATTTATTTTGAAACTTTTCCATCATTACA AGCCGTAGCAACTTTAGGGCTATACGCTTTGTTATTTCTGACCGGACTGGAGAGTGAATTAGAGGAACTTGTAGCAGTTG GAGCACAAGCTTTCACTGTTGCAATGGCAGGAGTGATTTTGCCATTTGCTTTTGGAACTTTTGGATTAATGTTTATTTTC CAAGTAGATATCATTCCTGCGATATTTGCTGGTGCATCTATGACCGCGACAAGTATTGGTATTACTGCAAGTGTTTTTGG TGAGCTTGGTTATTTAAAAACTCGTGAGGGTCAAATTGTTATTGGCGCAGCAGTATTGGATGACATACTTGGAATTGTTA TTCTTGCCGTTGTTGTAGCTCTTGCGACGGGAGGATCATTACAAATTGCTCCCATTGTTAAATTAGTACTTGCTGCAACT GTTTTTGTGTTTGCTGCAATTGCTTTAAGTCGAACAGCTGCTCCAGCCTTTGATTGGTTGCTTGAGAGACTTAAAGCTCC CGGAGCGGTTGTTGTAGCTTCTTTTGTGATACTAGTCTTGAGCTGTTTTGTTGCTACTGCTATAGGTTTAGAAGCTGCTT TGGGTGCTTTTGCTGCTGGATTGATACTAAGTAGTTCAAAAAATAATCACGCAATTCAACAATCTGTTTTGCCATTAGTA TCGCTCTTCGCAACTATCTTCTTTGTACTTGTTGGAGCAGGTATGGATCTTTCTGTGATCAATCCTCTTGATCCACAGAG TCGCTCTGCTCTAATCGTGGCTGGTTTTTTATTTATTGTGGCAATTGTCGGGAAAATCGCTGCTGGCTGGTGCTTTGTCA TTGATAAACCAACAAATAGATTAGTAGTTGGCCTGGGAATGATGCCTCGAGGTGAGGTCGGATTGATTTTTCTAGGTTTG GGAACAAGTGCTGGTTTGCTTACCCCTTCTCTTGAGGCTGCAATATTGTTAATGGTAATTGGAACAACATTTTTAGCACC TGTTTTGCTTAGAGTTGTTTTGAAAGATAAACCTCCTTCAGGAGGCAACTCTATTCCTGATGAGATTGCAGCTGATCCAG TTGGATTGGTTTAG
Upstream 100 bases:
>100_bases TCCACACCTTATTGATTAAGTCACCTTTGATACTTATGGCAAATATGCCCTGTGATTAGGTAATTTATGTCTTAAAGAAA AGGCTTTTCTAGAAAACCTG
Downstream 100 bases:
>100_bases AAATCATCAAAAACTCTTTTTCAAAAAGGTGAGGCAATTTCGAAAAAAAGAAATAAAATCATTAATCTTTTTCTATCAAT TATTTACTAAGATCTAGAAG
Product: CPA2 family Na+/H+ antiporter
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MVLTPLVSALNTHDVEVAETLIGVINFLMIFVAARTLAEILVRLSLPTIVGELLAGVLIGASGLHLLLPPSAHAELNQGF VSVISTLASVPKEAVPDIYFETFPSLQAVATLGLYALLFLTGLESELEELVAVGAQAFTVAMAGVILPFAFGTFGLMFIF QVDIIPAIFAGASMTATSIGITASVFGELGYLKTREGQIVIGAAVLDDILGIVILAVVVALATGGSLQIAPIVKLVLAAT VFVFAAIALSRTAAPAFDWLLERLKAPGAVVVASFVILVLSCFVATAIGLEAALGAFAAGLILSSSKNNHAIQQSVLPLV SLFATIFFVLVGAGMDLSVINPLDPQSRSALIVAGFLFIVAIVGKIAAGWCFVIDKPTNRLVVGLGMMPRGEVGLIFLGL GTSAGLLTPSLEAAILLMVIGTTFLAPVLLRVVLKDKPPSGGNSIPDEIAADPVGLV
Sequences:
>Translated_457_residues MVLTPLVSALNTHDVEVAETLIGVINFLMIFVAARTLAEILVRLSLPTIVGELLAGVLIGASGLHLLLPPSAHAELNQGF VSVISTLASVPKEAVPDIYFETFPSLQAVATLGLYALLFLTGLESELEELVAVGAQAFTVAMAGVILPFAFGTFGLMFIF QVDIIPAIFAGASMTATSIGITASVFGELGYLKTREGQIVIGAAVLDDILGIVILAVVVALATGGSLQIAPIVKLVLAAT VFVFAAIALSRTAAPAFDWLLERLKAPGAVVVASFVILVLSCFVATAIGLEAALGAFAAGLILSSSKNNHAIQQSVLPLV SLFATIFFVLVGAGMDLSVINPLDPQSRSALIVAGFLFIVAIVGKIAAGWCFVIDKPTNRLVVGLGMMPRGEVGLIFLGL GTSAGLLTPSLEAAILLMVIGTTFLAPVLLRVVLKDKPPSGGNSIPDEIAADPVGLV >Mature_457_residues MVLTPLVSALNTHDVEVAETLIGVINFLMIFVAARTLAEILVRLSLPTIVGELLAGVLIGASGLHLLLPPSAHAELNQGF VSVISTLASVPKEAVPDIYFETFPSLQAVATLGLYALLFLTGLESELEELVAVGAQAFTVAMAGVILPFAFGTFGLMFIF QVDIIPAIFAGASMTATSIGITASVFGELGYLKTREGQIVIGAAVLDDILGIVILAVVVALATGGSLQIAPIVKLVLAAT VFVFAAIALSRTAAPAFDWLLERLKAPGAVVVASFVILVLSCFVATAIGLEAALGAFAAGLILSSSKNNHAIQQSVLPLV SLFATIFFVLVGAGMDLSVINPLDPQSRSALIVAGFLFIVAIVGKIAAGWCFVIDKPTNRLVVGLGMMPRGEVGLIFLGL GTSAGLLTPSLEAAILLMVIGTTFLAPVLLRVVLKDKPPSGGNSIPDEIAADPVGLV
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=430, Percent_Identity=25.1162790697674, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322367, Length=436, Percent_Identity=21.5596330275229, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 47085; Mature: 47085
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTPLVSALNTHDVEVAETLIGVINFLMIFVAARTLAEILVRLSLPTIVGELLAGVLIG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASGLHLLLPPSAHAELNQGFVSVISTLASVPKEAVPDIYFETFPSLQAVATLGLYALLFL CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHH TGLESELEELVAVGAQAFTVAMAGVILPFAFGTFGLMFIFQVDIIPAIFAGASMTATSIG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ITASVFGELGYLKTREGQIVIGAAVLDDILGIVILAVVVALATGGSLQIAPIVKLVLAAT HHHHHHHHHCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH VFVFAAIALSRTAAPAFDWLLERLKAPGAVVVASFVILVLSCFVATAIGLEAALGAFAAG HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILSSSKNNHAIQQSVLPLVSLFATIFFVLVGAGMDLSVINPLDPQSRSALIVAGFLFIV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHH AIVGKIAAGWCFVIDKPTNRLVVGLGMMPRGEVGLIFLGLGTSAGLLTPSLEAAILLMVI HHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH GTTFLAPVLLRVVLKDKPPSGGNSIPDEIAADPVGLV HHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MVLTPLVSALNTHDVEVAETLIGVINFLMIFVAARTLAEILVRLSLPTIVGELLAGVLIG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASGLHLLLPPSAHAELNQGFVSVISTLASVPKEAVPDIYFETFPSLQAVATLGLYALLFL CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHH TGLESELEELVAVGAQAFTVAMAGVILPFAFGTFGLMFIFQVDIIPAIFAGASMTATSIG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ITASVFGELGYLKTREGQIVIGAAVLDDILGIVILAVVVALATGGSLQIAPIVKLVLAAT HHHHHHHHHCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH VFVFAAIALSRTAAPAFDWLLERLKAPGAVVVASFVILVLSCFVATAIGLEAALGAFAAG HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILSSSKNNHAIQQSVLPLVSLFATIFFVLVGAGMDLSVINPLDPQSRSALIVAGFLFIV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHH AIVGKIAAGWCFVIDKPTNRLVVGLGMMPRGEVGLIFLGLGTSAGLLTPSLEAAILLMVI HHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH GTTFLAPVLLRVVLKDKPPSGGNSIPDEIAADPVGLV HHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]