| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is galM [H]
Identifier: 124026753
GI number: 124026753
Start: 1691663
End: 1692520
Strand: Reverse
Name: galM [H]
Synonym: NATL1_20481
Alternate gene names: 124026753
Gene position: 1692520-1691663 (Counterclockwise)
Preceding gene: 124026754
Following gene: 124026752
Centisome position: 90.76
GC content: 34.38
Gene sequence:
>858_bases ATGACCGTCAGTTTCGAAAAAAAGAAAAAGCCTTATCCTCATTGGGAATATTCAAACCCTGAATTCGATTCATCAATAAG AATTGTCCCTGAAAGAGGAGGTTTGATTACTGAATGGCGCAGCGAAGGGAAGGAACTTTTGTACTTTGATTTAGAGCGTT TTCTAGACAAAGATAAAAGTGTCAGAGGAGGAATACCTATCCTTTTTCCCATATGCGGTGATTTGTCTGAGGGCTATTCA AATGGCGGCAAGAAGTATTTTTTAAAACAGCATGGTTTTGCAAGAGATTTACCTTGGTCAATAAATTTGTTAAAAGATAA ACTAGGAATAAGGCTTAAACTCACTGATACAAAGGATTCACGTTCTTATTTTCCCTTCTTTTTTACTTTGTGGATGGACG TTTGCTTGAAAGAAAAAAGTCTTCAAATATCAATTAAAATCCACAATCAGAGTCAAGATTCTATGCCTTTCAGTTTTGGT CTGCATCCATATTTTCAAGTTTCAAATACACAAAAAATAAAGATAGATGGTTTGCCTGAAAAATGTATTGATCAAACTAA TATGAAAGTTACTAATGTCTCTGATCAGATAAGGATTTTAGATAAAGGTGTTGATTTTCTTTCTTATCCTTCTTCTTCGG TTAAAATGTTTGATTTTTTATCTAGGAATGTAATTGAATTAATTCATCAAGAGCCTATGGATACAACAGTCATATGGACT GACCCTCCTAGACAAATGGTTTGTCTAGAGCCTTGGACTAGCCCAAGGAATTCCCTGGTTACTGGAGATAGAAAGCTGGA AATCAAGCCAGAAGAATATATAGATTTATCTACCACTTTTCAGCATAATTCTTTTTAG
Upstream 100 bases:
>100_bases TACAAAAGAAGTTGTTTTAGACGCTGGTCATTGTCCTCATGATGAAGTGCCCGATCAGGTTAATTCCGCTCTTTTAGAAT GGATTAATCAGCTCTAATCG
Downstream 100 bases:
>100_bases TTATTTAAGTTTTTGATGAGTATAGTTTCTAACTAATTAAATTTAATTTATAGCTTTTTGTATCACAAATATTTCAATAT TTTGTTCATTTTTGCAACTA
Product: galactose mutarotase-like protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTVSFEKKKKPYPHWEYSNPEFDSSIRIVPERGGLITEWRSEGKELLYFDLERFLDKDKSVRGGIPILFPICGDLSEGYS NGGKKYFLKQHGFARDLPWSINLLKDKLGIRLKLTDTKDSRSYFPFFFTLWMDVCLKEKSLQISIKIHNQSQDSMPFSFG LHPYFQVSNTQKIKIDGLPEKCIDQTNMKVTNVSDQIRILDKGVDFLSYPSSSVKMFDFLSRNVIELIHQEPMDTTVIWT DPPRQMVCLEPWTSPRNSLVTGDRKLEIKPEEYIDLSTTFQHNSF
Sequences:
>Translated_285_residues MTVSFEKKKKPYPHWEYSNPEFDSSIRIVPERGGLITEWRSEGKELLYFDLERFLDKDKSVRGGIPILFPICGDLSEGYS NGGKKYFLKQHGFARDLPWSINLLKDKLGIRLKLTDTKDSRSYFPFFFTLWMDVCLKEKSLQISIKIHNQSQDSMPFSFG LHPYFQVSNTQKIKIDGLPEKCIDQTNMKVTNVSDQIRILDKGVDFLSYPSSSVKMFDFLSRNVIELIHQEPMDTTVIWT DPPRQMVCLEPWTSPRNSLVTGDRKLEIKPEEYIDLSTTFQHNSF >Mature_284_residues TVSFEKKKKPYPHWEYSNPEFDSSIRIVPERGGLITEWRSEGKELLYFDLERFLDKDKSVRGGIPILFPICGDLSEGYSN GGKKYFLKQHGFARDLPWSINLLKDKLGIRLKLTDTKDSRSYFPFFFTLWMDVCLKEKSLQISIKIHNQSQDSMPFSFGL HPYFQVSNTQKIKIDGLPEKCIDQTNMKVTNVSDQIRILDKGVDFLSYPSSSVKMFDFLSRNVIELIHQEPMDTTVIWTD PPRQMVCLEPWTSPRNSLVTGDRKLEIKPEEYIDLSTTFQHNSF
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=238, Percent_Identity=24.7899159663866, Blast_Score=75, Evalue=5e-15, Organism=Drosophila melanogaster, GI19921284, Length=162, Percent_Identity=31.4814814814815, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 33214; Mature: 33083
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSFEKKKKPYPHWEYSNPEFDSSIRIVPERGGLITEWRSEGKELLYFDLERFLDKDKS CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHCCCEEEEEHHHHHHCCCCC VRGGIPILFPICGDLSEGYSNGGKKYFLKQHGFARDLPWSINLLKDKLGIRLKLTDTKDS CCCCCCEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEEHHCCCEEEEEECCCCC RSYFPFFFTLWMDVCLKEKSLQISIKIHNQSQDSMPFSFGLHPYFQVSNTQKIKIDGLPE CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCCEEEEECCCCEEEECCCCH KCIDQTNMKVTNVSDQIRILDKGVDFLSYPSSSVKMFDFLSRNVIELIHQEPMDTTVIWT HHHCCCCCEEECCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE DPPRQMVCLEPWTSPRNSLVTGDRKLEIKPEEYIDLSTTFQHNSF CCCCCEEEECCCCCCCCCEEECCEEEEECHHHHEEEEEECCCCCC >Mature Secondary Structure TVSFEKKKKPYPHWEYSNPEFDSSIRIVPERGGLITEWRSEGKELLYFDLERFLDKDKS CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHCCCEEEEEHHHHHHCCCCC VRGGIPILFPICGDLSEGYSNGGKKYFLKQHGFARDLPWSINLLKDKLGIRLKLTDTKDS CCCCCCEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEEHHCCCEEEEEECCCCC RSYFPFFFTLWMDVCLKEKSLQISIKIHNQSQDSMPFSFGLHPYFQVSNTQKIKIDGLPE CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCCEEEEECCCCEEEECCCCH KCIDQTNMKVTNVSDQIRILDKGVDFLSYPSSSVKMFDFLSRNVIELIHQEPMDTTVIWT HHHCCCCCEEECCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE DPPRQMVCLEPWTSPRNSLVTGDRKLEIKPEEYIDLSTTFQHNSF CCCCCEEEECCCCCCCCCEEECCEEEEECHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]