| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026751
Identifier: 124026751
GI number: 124026751
Start: 1688949
End: 1690301
Strand: Reverse
Name: 124026751
Synonym: NATL1_20461
Alternate gene names: NA
Gene position: 1690301-1688949 (Counterclockwise)
Preceding gene: 124026752
Following gene: 124026749
Centisome position: 90.65
GC content: 30.23
Gene sequence:
>1353_bases ATGAAAATAATTATTTTTGATGATGATCCAACTGGATCTCAAACTGTTTATGGATGCCCATTATTATTAAATTGGGATGA ACAAAATCTAGAGAAAGCATTTAAACAGTCTTCTCCTTTAATATTTATACTTGCGAACACAAGATCTTTATCTTCTGTGT TGGCTGCTAAGAAAACCAGAGAAATATGCTCATCTATTAAGAAATTTTTTGTAAGACAAGGATATTCCAAAAATGATTTC TTTTATATTAGTAGAGGTGATTCAACCTTACGTGGTCATGGTGTTTTAGAACCTGCAATTCTTGCGGAAGAATTAGGACC ATTTGATGCAACATTTCACATTCCAGCTTTTTTGGAAGGTGGAAGAACAACTGAAAACGGTATTCATTATTTAAATGGTA TACCTGTTCATACTACTGATTTTGGTCATGATAATATTTTTGGATTTTCTACTAGTAATTTAGCTAAATGGATTGAAGAA AAAAGTTTTGGAAAGATTAAGGCGAAAAATATCTTGCACGTTAAAATTAAACAATTAGACATGGCTTTTAATGATGAAGA TGGTTTTGAATCTCTTTTAAAATTTTTATCTAAATTAGAAAATAATACTTCAGTTGTTGTGGATGCTAAATTACCTCATC ATCTAGAAATACTAGCTAGTGCGATCAAAGTAGTTTCTAAAGAAAAAAGATTTCTTTTTAGGACTGCAGCAAGCTTTATA AAATCTTTATCTGCATTGCCACCTAACCCTAAATGTACTGCAGATTTAGTTTCTTTGAAATCGAAAAATAATGAGTATAA ATATAAGCCAGGTTTGATAATAGTTGGCTCCCATGTGAAATTAGCGACAGATCAATTAGAGGTTTTAATGATGGATAATT CCTGTAAAGGGTTGGAAATACCAGTCAGTAAATTAGCTAATATATTTGCTTTGGAAGATCGTAAACAGGCAATCTTAGAA ATTGAGTATACTTTATTATCGAAAATAGATGATATTTTGGATTTAGAAAAAGTACCTGTTTTATATACTTCTCGAGAAGA AAGGAAGTTTTCTTCTTACTCTGAAAGGATGACTTTTGGACTTGAACTTGCAGAGTTTATGTCAATTTTAGTTAGAAAAA TCACTAATAAATTGGGTTATATTATTAGTAAAGGAGGTATTACAACACAAATCTTACTTCAGAAAGGGTTCAATTTTAAT CATGTACATTTAAAAGGACAAATATTACCAGGGTTGTCAATAGTAACAGGTGATTCTGATCAATATAATTTACCAGTAGT TACTTTCCCAGGCAATCTTGGAAATGAGAAAACACTACTAGAAGTATTAAAATTGATGGATTCAATTTCTTAA
Upstream 100 bases:
>100_bases ATGTGGGTCTGTTGCCGATTTAAATAAATCTTATATTCAAGTTCCTGAAAGTTGGGAGAGATTCGAAAAAATCTTTGATT GAATAATAGATTTATTTTCT
Downstream 100 bases:
>100_bases TTTGTAAAGACTCTAGATAAAATTAGTTAAAATCTTTCAACAATTGAGTTCGCAAAATCACTACAACTAAGAGGCTCTAC GCGTGGTTCCATTAATCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKIIIFDDDPTGSQTVYGCPLLLNWDEQNLEKAFKQSSPLIFILANTRSLSSVLAAKKTREICSSIKKFFVRQGYSKNDF FYISRGDSTLRGHGVLEPAILAEELGPFDATFHIPAFLEGGRTTENGIHYLNGIPVHTTDFGHDNIFGFSTSNLAKWIEE KSFGKIKAKNILHVKIKQLDMAFNDEDGFESLLKFLSKLENNTSVVVDAKLPHHLEILASAIKVVSKEKRFLFRTAASFI KSLSALPPNPKCTADLVSLKSKNNEYKYKPGLIIVGSHVKLATDQLEVLMMDNSCKGLEIPVSKLANIFALEDRKQAILE IEYTLLSKIDDILDLEKVPVLYTSREERKFSSYSERMTFGLELAEFMSILVRKITNKLGYIISKGGITTQILLQKGFNFN HVHLKGQILPGLSIVTGDSDQYNLPVVTFPGNLGNEKTLLEVLKLMDSIS
Sequences:
>Translated_450_residues MKIIIFDDDPTGSQTVYGCPLLLNWDEQNLEKAFKQSSPLIFILANTRSLSSVLAAKKTREICSSIKKFFVRQGYSKNDF FYISRGDSTLRGHGVLEPAILAEELGPFDATFHIPAFLEGGRTTENGIHYLNGIPVHTTDFGHDNIFGFSTSNLAKWIEE KSFGKIKAKNILHVKIKQLDMAFNDEDGFESLLKFLSKLENNTSVVVDAKLPHHLEILASAIKVVSKEKRFLFRTAASFI KSLSALPPNPKCTADLVSLKSKNNEYKYKPGLIIVGSHVKLATDQLEVLMMDNSCKGLEIPVSKLANIFALEDRKQAILE IEYTLLSKIDDILDLEKVPVLYTSREERKFSSYSERMTFGLELAEFMSILVRKITNKLGYIISKGGITTQILLQKGFNFN HVHLKGQILPGLSIVTGDSDQYNLPVVTFPGNLGNEKTLLEVLKLMDSIS >Mature_450_residues MKIIIFDDDPTGSQTVYGCPLLLNWDEQNLEKAFKQSSPLIFILANTRSLSSVLAAKKTREICSSIKKFFVRQGYSKNDF FYISRGDSTLRGHGVLEPAILAEELGPFDATFHIPAFLEGGRTTENGIHYLNGIPVHTTDFGHDNIFGFSTSNLAKWIEE KSFGKIKAKNILHVKIKQLDMAFNDEDGFESLLKFLSKLENNTSVVVDAKLPHHLEILASAIKVVSKEKRFLFRTAASFI KSLSALPPNPKCTADLVSLKSKNNEYKYKPGLIIVGSHVKLATDQLEVLMMDNSCKGLEIPVSKLANIFALEDRKQAILE IEYTLLSKIDDILDLEKVPVLYTSREERKFSSYSERMTFGLELAEFMSILVRKITNKLGYIISKGGITTQILLQKGFNFN HVHLKGQILPGLSIVTGDSDQYNLPVVTFPGNLGNEKTLLEVLKLMDSIS
Specific function: Unknown
COG id: COG3395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50345; Mature: 50345
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIFDDDPTGSQTVYGCPLLLNWDEQNLEKAFKQSSPLIFILANTRSLSSVLAAKKTR CEEEEECCCCCCCCEEEECEEEEECCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH EICSSIKKFFVRQGYSKNDFFYISRGDSTLRGHGVLEPAILAEELGPFDATFHIPAFLEG HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCEECC GRTTENGIHYLNGIPVHTTDFGHDNIFGFSTSNLAKWIEEKSFGKIKAKNILHVKIKQLD CCCCCCCCEEECCEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCEEECCEEEEEEEEEE MAFNDEDGFESLLKFLSKLENNTSVVVDAKLPHHLEILASAIKVVSKEKRFLFRTAASFI ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLSALPPNPKCTADLVSLKSKNNEYKYKPGLIIVGSHVKLATDQLEVLMMDNSCKGLEI HHHHCCCCCCCCHHHHHHHHCCCCCEEECCCEEEEECCEEEECCCEEEEEECCCCCCCCC PVSKLANIFALEDRKQAILEIEYTLLSKIDDILDLEKVPVLYTSREERKFSSYSERMTFG CHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH LELAEFMSILVRKITNKLGYIISKGGITTQILLQKGFNFNHVHLKGQILPGLSIVTGDSD HHHHHHHHHHHHHHHHHHCEEEECCCCEEEHHHHCCCCCCEEEEEEEECCCEEEEECCCC QYNLPVVTFPGNLGNEKTLLEVLKLMDSIS CCCCEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKIIIFDDDPTGSQTVYGCPLLLNWDEQNLEKAFKQSSPLIFILANTRSLSSVLAAKKTR CEEEEECCCCCCCCEEEECEEEEECCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH EICSSIKKFFVRQGYSKNDFFYISRGDSTLRGHGVLEPAILAEELGPFDATFHIPAFLEG HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCEECC GRTTENGIHYLNGIPVHTTDFGHDNIFGFSTSNLAKWIEEKSFGKIKAKNILHVKIKQLD CCCCCCCCEEECCEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCEEECCEEEEEEEEEE MAFNDEDGFESLLKFLSKLENNTSVVVDAKLPHHLEILASAIKVVSKEKRFLFRTAASFI ECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLSALPPNPKCTADLVSLKSKNNEYKYKPGLIIVGSHVKLATDQLEVLMMDNSCKGLEI HHHHCCCCCCCCHHHHHHHHCCCCCEEECCCEEEEECCEEEECCCEEEEEECCCCCCCCC PVSKLANIFALEDRKQAILEIEYTLLSKIDDILDLEKVPVLYTSREERKFSSYSERMTFG CHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH LELAEFMSILVRKITNKLGYIISKGGITTQILLQKGFNFNHVHLKGQILPGLSIVTGDSD HHHHHHHHHHHHHHHHHHCEEEECCCCEEEHHHHCCCCCCEEEEEEEECCCEEEEECCCC QYNLPVVTFPGNLGNEKTLLEVLKLMDSIS CCCCEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA