Click here to switch to the map view.

The map label for this gene is pebA

Identifier: 124026748

GI number: 124026748

Start: 1685827

End: 1686543

Strand: Reverse

Name: pebA

Synonym: NATL1_20431

Alternate gene names: 124026748

Gene position: 1686543-1685827 (Counterclockwise)

Preceding gene: 124026749

Following gene: 124026747

Centisome position: 90.44

GC content: 31.94

Gene sequence:

>717_bases
ATGTTTAATGACCTGTTAAGTGAGTTAACAAAAAATATTCTTGAACATGGCGGTAAAAAGTTGATTGTTCCGAATGAATT
TTGTGAATGCGTTTCAAAACAAGGTAATTGTAAACTCAACAGCTGGTTATGGGATGTTCCAGGATTTCGAAGGTGGAGAG
TCACCAGATTGGACGCAGGAGATCGCCTTCAGGTATTAAATTCAGTTGCTTATCCTAATGAACAAAATGATATGCCAATT
ATGGGTATTGACCTTTTGTGGTTTGAAAAAAAACAAAAGCTAGTTGCGATTCTTGATTTCCAGCCTCTAGTTCAAGATAA
AGAATATTTAGATAGATATTTTGATGGCTTGAAAAGCCTCAAAAAAAGTTTTAATGAGTTTAACTCTGATATGAAAAGTA
ATATATATGATCCAACTAAGTACTTCTCGCCATGGGCTCTATTTTGCAAAGGAGGTAACTTTGAAGCGGAAAATATTTTA
CCAAAAATTTTTAGTTCTTTTCTTAAATGTTATTGGAAAAATCTTGATTTGTCTAAAGCTAATGAAAATCATATTAAATC
TCAAGAGGTCAGCATATTGCATATAGACTATGATAAATATAGTGCTGAAAAAGATCCTGCTCATGGTTTGTTTTCTGGCT
TTTTCGGTAAAGAATGGTCAGAGAAATATATGAAAGAATTTTTATTTCCTTTAAGCCTAGAAAACATTAATTCTTAA

Upstream 100 bases:

>100_bases
GAAATATAAAAGTGTAAAAGTTTTGTATTTATTCTCTTTAACTGATTTAATTTTTTTAAGGGAGAAGACTTTATTAAACT
CTGTAAGGAGATGACTGTAT

Downstream 100 bases:

>100_bases
GTTTATTTTTTAAATGCAAATTATTCGAAATAATAGTCAGGATCCTATTTCAATAAGTAATTGGCGTTGGGCTTGTTTCT
TAGATGAAACTATTAAGGCC

Product: dihydrobiliverdin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MFNDLLSELTKNILEHGGKKLIVPNEFCECVSKQGNCKLNSWLWDVPGFRRWRVTRLDAGDRLQVLNSVAYPNEQNDMPI
MGIDLLWFEKKQKLVAILDFQPLVQDKEYLDRYFDGLKSLKKSFNEFNSDMKSNIYDPTKYFSPWALFCKGGNFEAENIL
PKIFSSFLKCYWKNLDLSKANENHIKSQEVSILHIDYDKYSAEKDPAHGLFSGFFGKEWSEKYMKEFLFPLSLENINS

Sequences:

>Translated_238_residues
MFNDLLSELTKNILEHGGKKLIVPNEFCECVSKQGNCKLNSWLWDVPGFRRWRVTRLDAGDRLQVLNSVAYPNEQNDMPI
MGIDLLWFEKKQKLVAILDFQPLVQDKEYLDRYFDGLKSLKKSFNEFNSDMKSNIYDPTKYFSPWALFCKGGNFEAENIL
PKIFSSFLKCYWKNLDLSKANENHIKSQEVSILHIDYDKYSAEKDPAHGLFSGFFGKEWSEKYMKEFLFPLSLENINS
>Mature_238_residues
MFNDLLSELTKNILEHGGKKLIVPNEFCECVSKQGNCKLNSWLWDVPGFRRWRVTRLDAGDRLQVLNSVAYPNEQNDMPI
MGIDLLWFEKKQKLVAILDFQPLVQDKEYLDRYFDGLKSLKKSFNEFNSDMKSNIYDPTKYFSPWALFCKGGNFEAENIL
PKIFSSFLKCYWKNLDLSKANENHIKSQEVSILHIDYDKYSAEKDPAHGLFSGFFGKEWSEKYMKEFLFPLSLENINS

Specific function: Catalyzes the two-electron reduction of biliverdin IX- alpha at the C15 methine bridge

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PEBA_PROM1 (A2C539)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001015863.1
- ProteinModelPortal:   A2C539
- SMR:   A2C539
- STRING:   A2C539
- GeneID:   4779879
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_20431
- eggNOG:   NOG41209
- HOGENOM:   HBG635096
- OMA:   GFRRWRV
- ProtClustDB:   PRK13247
- BioCyc:   PMAR167555:NATL1_20431-MONOMER
- HAMAP:   MF_00792
- InterPro:   IPR009249

Pfam domain/function: PF05996 Fe_bilin_red

EC number: =1.3.7.2

Molecular weight: Translated: 27889; Mature: 27889

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNDLLSELTKNILEHGGKKLIVPNEFCECVSKQGNCKLNSWLWDVPGFRRWRVTRLDAG
CHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCEECCEEECCCCCCEEEEEECCCC
DRLQVLNSVAYPNEQNDMPIMGIDLLWFEKKQKLVAILDFQPLVQDKEYLDRYFDGLKSL
CHHHHHHHHCCCCCCCCCCEEEEHHHEECCCCCEEEEECCCHHHCCHHHHHHHHHHHHHH
KKSFNEFNSDMKSNIYDPTKYFSPWALFCKGGNFEAENILPKIFSSFLKCYWKNLDLSKA
HHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NENHIKSQEVSILHIDYDKYSAEKDPAHGLFSGFFGKEWSEKYMKEFLFPLSLENINS
CCCCCCCCCEEEEEEECHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFNDLLSELTKNILEHGGKKLIVPNEFCECVSKQGNCKLNSWLWDVPGFRRWRVTRLDAG
CHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCEECCEEECCCCCCEEEEEECCCC
DRLQVLNSVAYPNEQNDMPIMGIDLLWFEKKQKLVAILDFQPLVQDKEYLDRYFDGLKSL
CHHHHHHHHCCCCCCCCCCEEEEHHHEECCCCCEEEEECCCHHHCCHHHHHHHHHHHHHH
KKSFNEFNSDMKSNIYDPTKYFSPWALFCKGGNFEAENILPKIFSSFLKCYWKNLDLSKA
HHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
NENHIKSQEVSILHIDYDKYSAEKDPAHGLFSGFFGKEWSEKYMKEFLFPLSLENINS
CCCCCCCCCEEEEEEECHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA