| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026727
Identifier: 124026727
GI number: 124026727
Start: 1666513
End: 1667652
Strand: Reverse
Name: 124026727
Synonym: NATL1_20221
Alternate gene names: NA
Gene position: 1667652-1666513 (Counterclockwise)
Preceding gene: 124026728
Following gene: 124026726
Centisome position: 89.43
GC content: 36.14
Gene sequence:
>1140_bases ATGACCAACTTTATGCTTTTAAAGGGGTTTGAAGTGGAGCTTTTTACTGGCACATATGCTGGTAAAAATGTGGGTGTTGC ATCTGCTATTACTGAAGATTTATCAGATTTTGTCAAAGAGCCGGATCAAAGAAATCTTGAGTACATAACTGTTCCAGATC AAAGATACGCTGTTTTAAAACATGCACTTTTACTACCAAGACAAAAACTTAGGAAATGGCTTGATTTTCAAAAACTTACA ATTCTGCCAGGAAGCACACTTAGTCTTGGTAATACAAAAATTTTTGAAAGGTCAGATTTAGAAAATTCTTATCACTCATT TATAGAAAAAAACTATGGAACGAATGTTGTAACAGCAAGTATTCACATTAATTTAGGTATTGAAAATTTATCCTTACTTT TTTCGGCCCTACGCTTGGTTAGATGTGAGGCATCATTATTTCTTGCATTAAGTGCTAGTTCTCCTTTCTTAGAAGGTCAG GCAACGGGTGCACATTCTCAAAGATGGGTGCAATTCCCTAAGACACCCTCTAATGTTCCCTTATTTGTGGATCACTCACA CTATGTGGCATGGGTTGAAGAGCAACTAGGTCAGGGCAGTATGCAAAATGAGAGACATTTGTGGACATCAGTAAGGCCAA ATGGTCCAGAAAGACCTCATGTTTTAAATCGATTAGAGCTAAGGATATGTGATTTAGTAGCTGATGTTGACTTGCTTTTG GCTATTACAGCGTTACTTGAACTCAGAATTATTAATCTTAAAAACAACATGAAAAAATTTGATCCAATTGAAGCAAGCTC CAAAACACAAGAAGAATTGGCTTTATTAGCAGATGAAAATGACTTGATAGCAGCCCAATCAAGTCTTGATGCCAATTTAT TTCATTGGAAAAATGGGCAACAAATCAAATGTCGTGATTGGATAAATGAACTTCTGTTAGATGTAACTCCTTTAGCTAAG GAGCTTGATATGTTTGAGTTACTGCAACCTATTAAAACTGTTTTGACCAACGGAAATCAATCAATGATGTGGCTTGATTC TTATTCCAAAGGAGTATCAATTCAGACCTTGCTTCAGGAGGGTATCGATGAAATGGAACTAGAGGAGACCAATTTCATGC AAATGAATTCAACCTATTAG
Upstream 100 bases:
>100_bases GGGTTGTTGCAGATTCCATTTCTTCTAATGAGTATCAAGAAACTTTAAATAAAGCCAAAGGGATGTTTACTGCTTTAGCT TGCTTAGACCCCCAAGATTT
Downstream 100 bases:
>100_bases TGACTAAGTCCGTAGAACTGCCTCATAATACGTTTATGTTGAAAAATCCTTCTAACGAAAATATCTCTAATCACTCGACA GTATGTGTTGAGGATCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTNFMLLKGFEVELFTGTYAGKNVGVASAITEDLSDFVKEPDQRNLEYITVPDQRYAVLKHALLLPRQKLRKWLDFQKLT ILPGSTLSLGNTKIFERSDLENSYHSFIEKNYGTNVVTASIHINLGIENLSLLFSALRLVRCEASLFLALSASSPFLEGQ ATGAHSQRWVQFPKTPSNVPLFVDHSHYVAWVEEQLGQGSMQNERHLWTSVRPNGPERPHVLNRLELRICDLVADVDLLL AITALLELRIINLKNNMKKFDPIEASSKTQEELALLADENDLIAAQSSLDANLFHWKNGQQIKCRDWINELLLDVTPLAK ELDMFELLQPIKTVLTNGNQSMMWLDSYSKGVSIQTLLQEGIDEMELEETNFMQMNSTY
Sequences:
>Translated_379_residues MTNFMLLKGFEVELFTGTYAGKNVGVASAITEDLSDFVKEPDQRNLEYITVPDQRYAVLKHALLLPRQKLRKWLDFQKLT ILPGSTLSLGNTKIFERSDLENSYHSFIEKNYGTNVVTASIHINLGIENLSLLFSALRLVRCEASLFLALSASSPFLEGQ ATGAHSQRWVQFPKTPSNVPLFVDHSHYVAWVEEQLGQGSMQNERHLWTSVRPNGPERPHVLNRLELRICDLVADVDLLL AITALLELRIINLKNNMKKFDPIEASSKTQEELALLADENDLIAAQSSLDANLFHWKNGQQIKCRDWINELLLDVTPLAK ELDMFELLQPIKTVLTNGNQSMMWLDSYSKGVSIQTLLQEGIDEMELEETNFMQMNSTY >Mature_378_residues TNFMLLKGFEVELFTGTYAGKNVGVASAITEDLSDFVKEPDQRNLEYITVPDQRYAVLKHALLLPRQKLRKWLDFQKLTI LPGSTLSLGNTKIFERSDLENSYHSFIEKNYGTNVVTASIHINLGIENLSLLFSALRLVRCEASLFLALSASSPFLEGQA TGAHSQRWVQFPKTPSNVPLFVDHSHYVAWVEEQLGQGSMQNERHLWTSVRPNGPERPHVLNRLELRICDLVADVDLLLA ITALLELRIINLKNNMKKFDPIEASSKTQEELALLADENDLIAAQSSLDANLFHWKNGQQIKCRDWINELLLDVTPLAKE LDMFELLQPIKTVLTNGNQSMMWLDSYSKGVSIQTLLQEGIDEMELEETNFMQMNSTY
Specific function: ATP-dependent carboxylate-amine ligase [H]
COG id: COG2170
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carboxylate-amine ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011793 - InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 43041; Mature: 42910
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFMLLKGFEVELFTGTYAGKNVGVASAITEDLSDFVKEPDQRNLEYITVPDQRYAVLK CCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHH HALLLPRQKLRKWLDFQKLTILPGSTLSLGNTKIFERSDLENSYHSFIEKNYGTNVVTAS HHHHCCHHHHHHHHCCCEEEECCCCCEECCCCEEEECCCCCHHHHHHHHHCCCCCEEEEE IHINLGIENLSLLFSALRLVRCEASLFLALSASSPFLEGQATGAHSQRWVQFPKTPSNVP EEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCE LFVDHSHYVAWVEEQLGQGSMQNERHLWTSVRPNGPERPHVLNRLELRICDLVADVDLLL EEEECCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AITALLELRIINLKNNMKKFDPIEASSKTQEELALLADENDLIAAQSSLDANLFHWKNGQ HHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCEEECCCCC QIKCRDWINELLLDVTPLAKELDMFELLQPIKTVLTNGNQSMMWLDSYSKGVSIQTLLQE EEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH GIDEMELEETNFMQMNSTY CCHHHHCCCCCEEEECCCC >Mature Secondary Structure TNFMLLKGFEVELFTGTYAGKNVGVASAITEDLSDFVKEPDQRNLEYITVPDQRYAVLK CCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHH HALLLPRQKLRKWLDFQKLTILPGSTLSLGNTKIFERSDLENSYHSFIEKNYGTNVVTAS HHHHCCHHHHHHHHCCCEEEECCCCCEECCCCEEEECCCCCHHHHHHHHHCCCCCEEEEE IHINLGIENLSLLFSALRLVRCEASLFLALSASSPFLEGQATGAHSQRWVQFPKTPSNVP EEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCE LFVDHSHYVAWVEEQLGQGSMQNERHLWTSVRPNGPERPHVLNRLELRICDLVADVDLLL EEEECCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AITALLELRIINLKNNMKKFDPIEASSKTQEELALLADENDLIAAQSSLDANLFHWKNGQ HHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEECCCCCCCEEECCCCC QIKCRDWINELLLDVTPLAKELDMFELLQPIKTVLTNGNQSMMWLDSYSKGVSIQTLLQE EEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH GIDEMELEETNFMQMNSTY CCHHHHCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA