| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is trpE [H]
Identifier: 124026728
GI number: 124026728
Start: 1667649
End: 1669169
Strand: Reverse
Name: trpE [H]
Synonym: NATL1_20231
Alternate gene names: 124026728
Gene position: 1669169-1667649 (Counterclockwise)
Preceding gene: 124026729
Following gene: 124026727
Centisome position: 89.51
GC content: 38.13
Gene sequence:
>1521_bases ATGCTTAATTTAGATAAGGAAGAATTTATTTTGTCAGCGTCCAGCGGGGCTAATTATATTCCGTTGGCAAAAAGTTGGCC GGCAGATTTAGAAACTCCTCTTACTACCTGGCTTAAAGTTGGTAATGATGCTCCTTCAGGAGTATTGCTTGAATCAGTAG AGGGTGGAGAAACTATCGGTAGGTGGAGTGTGGTTGCATCAGATCCCCTTTGGAAAGTAGTAGTAAGGGGCGATGAATTA ACTAGATGCTGGAGGGATGGAAAACAAGAAAAGTTTCATGGAAATCCAGTGGAAATCCTCAGGAAAATGCTTGAGCCGTA TAAATCTGTTTCTTTGCCTGGCTTGCCACAACTGGGACAACTTTTTGGCATGTGGGGATATGAACTAATTCAATGGATAG AGCCCTCAGTGCCTACTTATGAATTATCAGATCAAGACTTACCTGATGGTATTTGGATGTTTATGGACAAAGTTCTGATT TTTGATCAAGTCAAACGCCTAATAACAGCTGTTGCATATGGAAATTTAAGTGATGGAGTTTCTTCTCAAAAAGCTTATGA AATTGCCTGTGAACAAATCAATGAACTGCAAGATTTAATGTCTTCTCCTTTAAAGCCAATAAAGTCTTTAAAGTGGAATC AAAAATCGAATAGATCTCCTGATATGGCTGCTAATACCTCAAAAAGTGAATTTGAACATAGTGTTGAAGCGGCAAAAGAA TTTATTAAACAAGGCGATGTTTTTCAGTTAGTTCTTAGTCAAAAATTGGAGTCGACTGTTACGCAAAAACCCTTTGAACT ATATCGAAGCCTAAGGATGGTAAATCCCTCTCCATTTATGGCGTTTTTTGACTTTGGTGACTGGCAACTTATTGGTTCTA GCCCGGAGGTAATGGTTAAGGCCCAAAAAACAGAAAAGGGTATTCAAACAAGTTTGAGACCAATTGCAGGTACACGTCCT AGAGGTAAAAATGATTTGGAAGATGCAGCCTTAGAGAAAGATCTTTTAAAAGATCCCAAAGAACGAGCAGAACATGTGAT GTTGGTAGATTTGGGTCGAAATGATTTAGGTCGTGTTTGTACCCCAGGTAGTGTTGTTGTGAAAGAATTAATGGTTATTG AAAAATATTCGCATGTAATGCATATCGTCAGTGAGGTTGAAGGCACTTTAAAAAAAGAACAGGATGTTTGGGACTTATTA ATTGCTTCTTTCCCAGCTGGGACTGTAAGTGGAGCCCCAAAAATAAGAGCAATGCAACTAATTAATCAATTAGAAAAACA ACGTAGAGGGCCTTATTCAGGCGTTTATGGGTCTATAGATTTAAATGGCGCATTAAATACAGCTATTACTATTAGGACAA TGATTGTACGTAAAAAAAATAAAAATGGTTTTACTGTTGAAGTGCAAGCAGGGGCAGGGGTTGTTGCAGATTCCATTTCT TCTAATGAGTATCAAGAAACTTTAAATAAAGCCAAAGGGATGTTTACTGCTTTAGCTTGCTTAGACCCCCAAGATTTATG A
Upstream 100 bases:
>100_bases AGTTTGAAATTTAGCGGTAAAAAAACTTACGATGCATAAGTAATTCAATTTAAACTTGTGTTCCCTTTGAATATATATAT TGGACTGCCATTATGCAGTC
Downstream 100 bases:
>100_bases CCAACTTTATGCTTTTAAAGGGGTTTGAAGTGGAGCTTTTTACTGGCACATATGCTGGTAAAAATGTGGGTGTTGCATCT GCTATTACTGAAGATTTATC
Product: anthranilate synthase component I/chorismate-binding protein
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MLNLDKEEFILSASSGANYIPLAKSWPADLETPLTTWLKVGNDAPSGVLLESVEGGETIGRWSVVASDPLWKVVVRGDEL TRCWRDGKQEKFHGNPVEILRKMLEPYKSVSLPGLPQLGQLFGMWGYELIQWIEPSVPTYELSDQDLPDGIWMFMDKVLI FDQVKRLITAVAYGNLSDGVSSQKAYEIACEQINELQDLMSSPLKPIKSLKWNQKSNRSPDMAANTSKSEFEHSVEAAKE FIKQGDVFQLVLSQKLESTVTQKPFELYRSLRMVNPSPFMAFFDFGDWQLIGSSPEVMVKAQKTEKGIQTSLRPIAGTRP RGKNDLEDAALEKDLLKDPKERAEHVMLVDLGRNDLGRVCTPGSVVVKELMVIEKYSHVMHIVSEVEGTLKKEQDVWDLL IASFPAGTVSGAPKIRAMQLINQLEKQRRGPYSGVYGSIDLNGALNTAITIRTMIVRKKNKNGFTVEVQAGAGVVADSIS SNEYQETLNKAKGMFTALACLDPQDL
Sequences:
>Translated_506_residues MLNLDKEEFILSASSGANYIPLAKSWPADLETPLTTWLKVGNDAPSGVLLESVEGGETIGRWSVVASDPLWKVVVRGDEL TRCWRDGKQEKFHGNPVEILRKMLEPYKSVSLPGLPQLGQLFGMWGYELIQWIEPSVPTYELSDQDLPDGIWMFMDKVLI FDQVKRLITAVAYGNLSDGVSSQKAYEIACEQINELQDLMSSPLKPIKSLKWNQKSNRSPDMAANTSKSEFEHSVEAAKE FIKQGDVFQLVLSQKLESTVTQKPFELYRSLRMVNPSPFMAFFDFGDWQLIGSSPEVMVKAQKTEKGIQTSLRPIAGTRP RGKNDLEDAALEKDLLKDPKERAEHVMLVDLGRNDLGRVCTPGSVVVKELMVIEKYSHVMHIVSEVEGTLKKEQDVWDLL IASFPAGTVSGAPKIRAMQLINQLEKQRRGPYSGVYGSIDLNGALNTAITIRTMIVRKKNKNGFTVEVQAGAGVVADSIS SNEYQETLNKAKGMFTALACLDPQDL >Mature_506_residues MLNLDKEEFILSASSGANYIPLAKSWPADLETPLTTWLKVGNDAPSGVLLESVEGGETIGRWSVVASDPLWKVVVRGDEL TRCWRDGKQEKFHGNPVEILRKMLEPYKSVSLPGLPQLGQLFGMWGYELIQWIEPSVPTYELSDQDLPDGIWMFMDKVLI FDQVKRLITAVAYGNLSDGVSSQKAYEIACEQINELQDLMSSPLKPIKSLKWNQKSNRSPDMAANTSKSEFEHSVEAAKE FIKQGDVFQLVLSQKLESTVTQKPFELYRSLRMVNPSPFMAFFDFGDWQLIGSSPEVMVKAQKTEKGIQTSLRPIAGTRP RGKNDLEDAALEKDLLKDPKERAEHVMLVDLGRNDLGRVCTPGSVVVKELMVIEKYSHVMHIVSEVEGTLKKEQDVWDLL IASFPAGTVSGAPKIRAMQLINQLEKQRRGPYSGVYGSIDLNGALNTAITIRTMIVRKKNKNGFTVEVQAGAGVVADSIS SNEYQETLNKAKGMFTALACLDPQDL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=386, Percent_Identity=36.5284974093264, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI1788114, Length=458, Percent_Identity=31.0043668122271, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI87082077, Length=275, Percent_Identity=26.1818181818182, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786809, Length=275, Percent_Identity=25.0909090909091, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=488, Percent_Identity=35.4508196721311, Blast_Score=284, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6324361, Length=407, Percent_Identity=26.044226044226, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 56329; Mature: 56329
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLDKEEFILSASSGANYIPLAKSWPADLETPLTTWLKVGNDAPSGVLLESVEGGETIG CCCCCHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCC RWSVVASDPLWKVVVRGDELTRCWRDGKQEKFHGNPVEILRKMLEPYKSVSLPGLPQLGQ CEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH LFGMWGYELIQWIEPSVPTYELSDQDLPDGIWMFMDKVLIFDQVKRLITAVAYGNLSDGV HHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSQKAYEIACEQINELQDLMSSPLKPIKSLKWNQKSNRSPDMAANTSKSEFEHSVEAAKE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FIKQGDVFQLVLSQKLESTVTQKPFELYRSLRMVNPSPFMAFFDFGDWQLIGSSPEVMVK HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCEEEE AQKTEKGIQTSLRPIAGTRPRGKNDLEDAALEKDLLKDPKERAEHVMLVDLGRNDLGRVC EHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCC TPGSVVVKELMVIEKYSHVMHIVSEVEGTLKKEQDVWDLLIASFPAGTVSGAPKIRAMQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH INQLEKQRRGPYSGVYGSIDLNGALNTAITIRTMIVRKKNKNGFTVEVQAGAGVVADSIS HHHHHHHHCCCCCCCEECEECCCCCCHHHHHHHHEEEECCCCCEEEEEECCCCHHHHCCC SNEYQETLNKAKGMFTALACLDPQDL CHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLNLDKEEFILSASSGANYIPLAKSWPADLETPLTTWLKVGNDAPSGVLLESVEGGETIG CCCCCHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCC RWSVVASDPLWKVVVRGDELTRCWRDGKQEKFHGNPVEILRKMLEPYKSVSLPGLPQLGQ CEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH LFGMWGYELIQWIEPSVPTYELSDQDLPDGIWMFMDKVLIFDQVKRLITAVAYGNLSDGV HHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSQKAYEIACEQINELQDLMSSPLKPIKSLKWNQKSNRSPDMAANTSKSEFEHSVEAAKE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FIKQGDVFQLVLSQKLESTVTQKPFELYRSLRMVNPSPFMAFFDFGDWQLIGSSPEVMVK HHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCEEEE AQKTEKGIQTSLRPIAGTRPRGKNDLEDAALEKDLLKDPKERAEHVMLVDLGRNDLGRVC EHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCC TPGSVVVKELMVIEKYSHVMHIVSEVEGTLKKEQDVWDLLIASFPAGTVSGAPKIRAMQL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH INQLEKQRRGPYSGVYGSIDLNGALNTAITIRTMIVRKKNKNGFTVEVQAGAGVVADSIS HHHHHHHHCCCCCCCEECEECCCCCCHHHHHHHHEEEECCCCCEEEEEECCCCHHHHCCC SNEYQETLNKAKGMFTALACLDPQDL CHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 3141423 [H]