| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is thiF [H]
Identifier: 124026720
GI number: 124026720
Start: 1657930
End: 1659075
Strand: Direct
Name: thiF [H]
Synonym: NATL1_20151
Alternate gene names: 124026720
Gene position: 1657930-1659075 (Clockwise)
Preceding gene: 124026719
Following gene: 124026722
Centisome position: 88.91
GC content: 32.55
Gene sequence:
>1146_bases ATGGAGCAAAGCCAGAGTAAGGCAAATTTAAGTTCAGAAGAAATTGCCAGGTATGCAAGACATATAAGTCTCCCAGAGAT AGGTATCAAAGGCCAAGAAAAATTGAAGACAAGCTCAGTTGCTTGCATTGGGACAGGAGGGCTAGGATCTCCACTTTTAA TTTATCTTGCAGCAGCTGGAATTGGACGTATCGGAATAGTTGATTTTGATGTCGTTGAATACTCAAATTTACAAAGACAA ATCATTCATACAACACATTCAATAGGTCTATTAAAAACAGATTCGGCCAAACAAGCTATACGCAAAATAAATCCTTCTTG TCGAGTTGATTTATTCAATCAAAAGCTAACAAGTAGTAATGCTTTGGAAATACTTAAAGCTTATGATGTGATATGTGATT GTTCAGACAATTTCCCAACGCGTTACCTGATTAATGATGCTTGTCTAATACTTAACAAACCTAATATATATGGTTCAATC GCAAGATTCGAAGGACAAGTAAGTGTATTTAATTTGAAGGAAGATAGCCCTAACTATAGAGACCTTATCCCCATACCCCC TCCACAAGAGTTAATTCCATCTTGCTCTGAAGCTGGAGTGATGGGAATTCTTCCAGGAATTATTGGTACAATTCAAGCAG CAGAAGCTATAAAGATAATAACAAACATTGGTTATCCACTTAACGGTAGGATTCTCATTTTTAATGCATTAAAAATGCAA TTTAAAGAACTAACTTTGAAATCCAATCCAGAAAATAAAAATATCCATAAATTAATAGATTATAAAAGTTTCTGTTCAGA AATTTCAGTTAAAGATGAAGTAGAATGTGATATAGAAAGTATTTCAGTTAAAGAATTAAAAGTACTTCTTAGACAATCTT CAAAAGAAATGTTATTAATAGATGTTCGCAACCAAGATGAATATCATCAATGTTCAATTACAGGTTCATTGCTCATACCT CTTAACTCTATTGAAAGTGGTAAAGCCATTGATGAAATTAAAATCCTTACCGCAAAAAAAAATCTTTATGTATTTTGTAA AAGTGGAAAAAGATCATTGCTTGCATTAAAGCATTTAAACAAATTTGGAATTAGAGGTATTAATATTCTTGGAGGTATTG ATGCGTGGAATAGCGAAAAAAATTAA
Upstream 100 bases:
>100_bases GAGATTTAAAAGCATGGTGGATTAAAAATAAATTAAAATTCCATAGCGTGAAAATTGAAGTTTTTTCTTTAACGTAAATA AATCAGCGAAGGTTTGATTA
Downstream 100 bases:
>100_bases TTAAAACTAATAATCAACTCCCCTTTTTAAATCAACTCCTTTTTCAGCATAGTGCTTGTGACACACCATCTCAGAATGAA CACTTGCTAAATCAAAATAT
Product: molybdopterin biosynthesis protein
Products: NA
Alternate protein names: Sulfur carrier protein CysO adenylyltransferase; Sulfur carrier protein CysO sulfurtransferase [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MEQSQSKANLSSEEIARYARHISLPEIGIKGQEKLKTSSVACIGTGGLGSPLLIYLAAAGIGRIGIVDFDVVEYSNLQRQ IIHTTHSIGLLKTDSAKQAIRKINPSCRVDLFNQKLTSSNALEILKAYDVICDCSDNFPTRYLINDACLILNKPNIYGSI ARFEGQVSVFNLKEDSPNYRDLIPIPPPQELIPSCSEAGVMGILPGIIGTIQAAEAIKIITNIGYPLNGRILIFNALKMQ FKELTLKSNPENKNIHKLIDYKSFCSEISVKDEVECDIESISVKELKVLLRQSSKEMLLIDVRNQDEYHQCSITGSLLIP LNSIESGKAIDEIKILTAKKNLYVFCKSGKRSLLALKHLNKFGIRGINILGGIDAWNSEKN
Sequences:
>Translated_381_residues MEQSQSKANLSSEEIARYARHISLPEIGIKGQEKLKTSSVACIGTGGLGSPLLIYLAAAGIGRIGIVDFDVVEYSNLQRQ IIHTTHSIGLLKTDSAKQAIRKINPSCRVDLFNQKLTSSNALEILKAYDVICDCSDNFPTRYLINDACLILNKPNIYGSI ARFEGQVSVFNLKEDSPNYRDLIPIPPPQELIPSCSEAGVMGILPGIIGTIQAAEAIKIITNIGYPLNGRILIFNALKMQ FKELTLKSNPENKNIHKLIDYKSFCSEISVKDEVECDIESISVKELKVLLRQSSKEMLLIDVRNQDEYHQCSITGSLLIP LNSIESGKAIDEIKILTAKKNLYVFCKSGKRSLLALKHLNKFGIRGINILGGIDAWNSEKN >Mature_381_residues MEQSQSKANLSSEEIARYARHISLPEIGIKGQEKLKTSSVACIGTGGLGSPLLIYLAAAGIGRIGIVDFDVVEYSNLQRQ IIHTTHSIGLLKTDSAKQAIRKINPSCRVDLFNQKLTSSNALEILKAYDVICDCSDNFPTRYLINDACLILNKPNIYGSI ARFEGQVSVFNLKEDSPNYRDLIPIPPPQELIPSCSEAGVMGILPGIIGTIQAAEAIKIITNIGYPLNGRILIFNALKMQ FKELTLKSNPENKNIHKLIDYKSFCSEISVKDEVECDIESISVKELKVLLRQSSKEMLLIDVRNQDEYHQCSITGSLLIP LNSIESGKAIDEIKILTAKKNLYVFCKSGKRSLLALKHLNKFGIRGINILGGIDAWNSEKN
Specific function: Catalyzes the conversion of the sulfur carrier protein CysO to CysO-thiocarboxylate. The reaction is thought to proceed in two steps:first, ATP-dependent activation of CysO as acyl- adenylate (CysO-COOAMP), followed by sulfur transfer to give CysO- thioca
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI7657339, Length=407, Percent_Identity=38.0835380835381, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI13376212, Length=268, Percent_Identity=27.9850746268657, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI23510338, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI23510340, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI38327032, Length=256, Percent_Identity=27.734375, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4885649, Length=165, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI150417996, Length=195, Percent_Identity=28.7179487179487, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1787048, Length=243, Percent_Identity=39.5061728395062, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI87082356, Length=238, Percent_Identity=39.0756302521008, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1789177, Length=111, Percent_Identity=32.4324324324324, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17540406, Length=395, Percent_Identity=33.6708860759494, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI193203301, Length=166, Percent_Identity=27.710843373494, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321903, Length=401, Percent_Identity=33.9152119700748, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320598, Length=140, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322639, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582879, Length=386, Percent_Identity=37.8238341968912, Blast_Score=271, Evalue=5e-73, Organism=Drosophila melanogaster, GI24660640, Length=139, Percent_Identity=30.2158273381295, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007901 - InterPro: IPR009036 - InterPro: IPR016040 - InterPro: IPR001763 - InterPro: IPR000594 [H]
Pfam domain/function: PF05237 MoeZ_MoeB; PF00581 Rhodanese; PF00899 ThiF [H]
EC number: NA
Molecular weight: Translated: 42090; Mature: 42090
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQSQSKANLSSEEIARYARHISLPEIGIKGQEKLKTSSVACIGTGGLGSPLLIYLAAAG CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHCC IGRIGIVDFDVVEYSNLQRQIIHTTHSIGLLKTDSAKQAIRKINPSCRVDLFNQKLTSSN CCEEEEEEEEHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCEEEEHHHHCCCCH ALEILKAYDVICDCSDNFPTRYLINDACLILNKPNIYGSIARFEGQVSVFNLKEDSPNYR HHHHHHHHHHEEECCCCCCCEEEECCEEEEEECCCCCEEHEEECCEEEEEEECCCCCCCC DLIPIPPPQELIPSCSEAGVMGILPGIIGTIQAAEAIKIITNIGYPLNGRILIFNALKMQ CCCCCCCCHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH FKELTLKSNPENKNIHKLIDYKSFCSEISVKDEVECDIESISVKELKVLLRQSSKEMLLI HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCEEEE DVRNQDEYHQCSITGSLLIPLNSIESGKAIDEIKILTAKKNLYVFCKSGKRSLLALKHLN EECCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHH KFGIRGINILGGIDAWNSEKN HHCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MEQSQSKANLSSEEIARYARHISLPEIGIKGQEKLKTSSVACIGTGGLGSPLLIYLAAAG CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHCC IGRIGIVDFDVVEYSNLQRQIIHTTHSIGLLKTDSAKQAIRKINPSCRVDLFNQKLTSSN CCEEEEEEEEHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCEEEEHHHHCCCCH ALEILKAYDVICDCSDNFPTRYLINDACLILNKPNIYGSIARFEGQVSVFNLKEDSPNYR HHHHHHHHHHEEECCCCCCCEEEECCEEEEEECCCCCEEHEEECCEEEEEEECCCCCCCC DLIPIPPPQELIPSCSEAGVMGILPGIIGTIQAAEAIKIITNIGYPLNGRILIFNALKMQ CCCCCCCCHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH FKELTLKSNPENKNIHKLIDYKSFCSEISVKDEVECDIESISVKELKVLLRQSSKEMLLI HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCEEEE DVRNQDEYHQCSITGSLLIPLNSIESGKAIDEIKILTAKKNLYVFCKSGKRSLLALKHLN EECCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHH KFGIRGINILGGIDAWNSEKN HHCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]