Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026722

Identifier: 124026722

GI number: 124026722

Start: 1660366

End: 1661208

Strand: Direct

Name: 124026722

Synonym: NATL1_20171

Alternate gene names: NA

Gene position: 1660366-1661208 (Clockwise)

Preceding gene: 124026720

Following gene: 124026733

Centisome position: 89.04

GC content: 34.52

Gene sequence:

>843_bases
GTGTTTTTTAGTCAACTTGAATCTTTAACAGACTCAGAACTAAAGCAATTAAAATTGTTAAGGGAGTTTATTAAAGACAT
AAATTATGTATGTGTTGCTTTTTCTGGAGGCGTTGATAGTTCTTTAGTAGCGACAATAGCCCATGAGCAACTAGGTTCAA
AAGCCTTTGCCGTTACTGGTGTCTCTCCTTCTTTAGCTCCATATTTGCTTAAGCAAGCGCGTCTTCAAGCAGACTGGATT
GGGATTCATCATGAAGAATGCCAAACAAATGAAATCAACCAACCAAATTACTTTAAAAATCCTGACAATAGATGTTTTGC
ATGCAAACAAGAATTACATACACATTTAACTGAAATTTCAAAAAAATTCCATAATGCTCAAGTCCTTGATGGAGTGAACT
ATGACGACCTTCACGACTATCGACCAGGCATTCAAGCATCAAATCAGGCAGGAGTAATATCACCTCTAGCTGAACTAGAA
ATAGATAAAAAATCAATTCGTTCAATTTCAAAATCATTAGGTTTACCCTGGTGGGATAAACCTGCACAACCATGTTTAGC
CTCTCGTATTCCTTTTGGAGAGGAAATAAGTTCAAAAAGGCTTAAGCAGATTGCGTTAGCAGAAGAATGGATTATTAATC
AAGGTTTTTCAAAAGTACGTGTAAGAAGTCAAGGCCTATCAGCCAGAATCGAATTACCAGCAAATGAAATAAATAACTTT
CTTAAAATCGTTGAAAGAAATAAATTAATTAAATATTTTTTATCTTTAGGTTTCCATTCTATAAGTCTAGATCTTGAGGG
TTTGATTAGTGGAAAACTCACAAGAGATATAAAGACTACTTAG

Upstream 100 bases:

>100_bases
TAACTTCTTATACAATAGACGTCATAGAATATGCAAAATACATACACAGATGAAGGAGACTAAGAGTCTCAATTTAATCA
AATCAATGATTTTTTAAAAA

Downstream 100 bases:

>100_bases
ACAATAAACTCCTATGTCGAAAAGATGATTGATTTATTTTTAATCTTTCATTGTGGTCAAGGTTCACGATGCAAAGCCTG
GATTCCGGCAGGGATCTCTC

Product: PP family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTGVSPSLAPYLLKQARLQADWI
GIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEISKKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELE
IDKKSIRSISKSLGLPWWDKPAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF
LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT

Sequences:

>Translated_280_residues
MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTGVSPSLAPYLLKQARLQADWI
GIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEISKKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELE
IDKKSIRSISKSLGLPWWDKPAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF
LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT
>Mature_280_residues
MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTGVSPSLAPYLLKQARLQADWI
GIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEISKKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELE
IDKKSIRSISKSLGLPWWDKPAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF
LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT

Specific function: Unknown

COG id: COG1606

COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0830 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005232
- InterPro:   IPR022310
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02540 NAD_synthase [H]

EC number: NA

Molecular weight: Translated: 31522; Mature: 31522

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC
VSPSLAPYLLKQARLQADWIGIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEIS
CCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELEIDKKSIRSISKSLGLPWWDK
HHHCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCC
PAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHH
LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC
VSPSLAPYLLKQARLQADWIGIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEIS
CCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELEIDKKSIRSISKSLGLPWWDK
HHHCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCC
PAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHH
LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]