| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026722
Identifier: 124026722
GI number: 124026722
Start: 1660366
End: 1661208
Strand: Direct
Name: 124026722
Synonym: NATL1_20171
Alternate gene names: NA
Gene position: 1660366-1661208 (Clockwise)
Preceding gene: 124026720
Following gene: 124026733
Centisome position: 89.04
GC content: 34.52
Gene sequence:
>843_bases GTGTTTTTTAGTCAACTTGAATCTTTAACAGACTCAGAACTAAAGCAATTAAAATTGTTAAGGGAGTTTATTAAAGACAT AAATTATGTATGTGTTGCTTTTTCTGGAGGCGTTGATAGTTCTTTAGTAGCGACAATAGCCCATGAGCAACTAGGTTCAA AAGCCTTTGCCGTTACTGGTGTCTCTCCTTCTTTAGCTCCATATTTGCTTAAGCAAGCGCGTCTTCAAGCAGACTGGATT GGGATTCATCATGAAGAATGCCAAACAAATGAAATCAACCAACCAAATTACTTTAAAAATCCTGACAATAGATGTTTTGC ATGCAAACAAGAATTACATACACATTTAACTGAAATTTCAAAAAAATTCCATAATGCTCAAGTCCTTGATGGAGTGAACT ATGACGACCTTCACGACTATCGACCAGGCATTCAAGCATCAAATCAGGCAGGAGTAATATCACCTCTAGCTGAACTAGAA ATAGATAAAAAATCAATTCGTTCAATTTCAAAATCATTAGGTTTACCCTGGTGGGATAAACCTGCACAACCATGTTTAGC CTCTCGTATTCCTTTTGGAGAGGAAATAAGTTCAAAAAGGCTTAAGCAGATTGCGTTAGCAGAAGAATGGATTATTAATC AAGGTTTTTCAAAAGTACGTGTAAGAAGTCAAGGCCTATCAGCCAGAATCGAATTACCAGCAAATGAAATAAATAACTTT CTTAAAATCGTTGAAAGAAATAAATTAATTAAATATTTTTTATCTTTAGGTTTCCATTCTATAAGTCTAGATCTTGAGGG TTTGATTAGTGGAAAACTCACAAGAGATATAAAGACTACTTAG
Upstream 100 bases:
>100_bases TAACTTCTTATACAATAGACGTCATAGAATATGCAAAATACATACACAGATGAAGGAGACTAAGAGTCTCAATTTAATCA AATCAATGATTTTTTAAAAA
Downstream 100 bases:
>100_bases ACAATAAACTCCTATGTCGAAAAGATGATTGATTTATTTTTAATCTTTCATTGTGGTCAAGGTTCACGATGCAAAGCCTG GATTCCGGCAGGGATCTCTC
Product: PP family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTGVSPSLAPYLLKQARLQADWI GIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEISKKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELE IDKKSIRSISKSLGLPWWDKPAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT
Sequences:
>Translated_280_residues MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTGVSPSLAPYLLKQARLQADWI GIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEISKKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELE IDKKSIRSISKSLGLPWWDKPAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT >Mature_280_residues MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTGVSPSLAPYLLKQARLQADWI GIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEISKKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELE IDKKSIRSISKSLGLPWWDKPAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 31522; Mature: 31522
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTG CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC VSPSLAPYLLKQARLQADWIGIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEIS CCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELEIDKKSIRSISKSLGLPWWDK HHHCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCC PAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHH LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHCCCCC >Mature Secondary Structure MFFSQLESLTDSELKQLKLLREFIKDINYVCVAFSGGVDSSLVATIAHEQLGSKAFAVTG CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC VSPSLAPYLLKQARLQADWIGIHHEECQTNEINQPNYFKNPDNRCFACKQELHTHLTEIS CCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KKFHNAQVLDGVNYDDLHDYRPGIQASNQAGVISPLAELEIDKKSIRSISKSLGLPWWDK HHHCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCC PAQPCLASRIPFGEEISSKRLKQIALAEEWIINQGFSKVRVRSQGLSARIELPANEINNF CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHH LKIVERNKLIKYFLSLGFHSISLDLEGLISGKLTRDIKTT HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]