| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is dinG
Identifier: 124026714
GI number: 124026714
Start: 1652048
End: 1653496
Strand: Reverse
Name: dinG
Synonym: NATL1_20091
Alternate gene names: NA
Gene position: 1653496-1652048 (Counterclockwise)
Preceding gene: 124026716
Following gene: 124026713
Centisome position: 88.67
GC content: 34.78
Gene sequence:
>1449_bases ATGCTTGAGGTGAATTCACATAAACATCTAAAAAAATACTATCAAAAAAATCTTGCTCTATGGCCTCATAATTTAACCCT TACAAGATTGATATCTAGAAGCTTAAGTCGTAAAGATAATACTTTTATTAAATTATCAAGTGACAGTAGAAATTTTTGGT GGCCTGGCCTCTTGATTCCACTTTGTTTGCATAATAATAAGATTGTGTTGATTCTTTCAGAGAGACAATATCGACGCTTG TTTGAAGTGGAATTACCAAAGTTAAGCTCTAGTCGATTAGGTTTCGATTATGTAGAAGGAATTGAACTAAGTCCCTCAGA TGAAAAAATTTGGGTTCTAAAATACCAAGATCTTATTTTTGCAAATGAAAAAGATTTATTAAAAAATCGCCAATTGATTT TTCCTGAATCTGAGTTTATTTCTAGCGAGCTTAGAGTGTCTATGTCAATTAAAATTACTCCAGAAGATTGGGAGAATTTA ATTGCTTCTCACTCACGTTTTGAAGCTTCAATTATTGAAGTTCATGAGCGTCTAAGTCGAAGTCTTTTCAATCAGTCATT AAGGTCTGATGCTGTTATAAGAATTGATTTTAGGGAGCTTTTAGCATTAAAAGAAATTCTCAAAGATGACTTGCCTTCCG TAATGCCTTGGCAGAGGGCTTTTAATGTCGTCAACAATGGATGGGTAACATGGGCGAAAATAGATAATCAAAAACTTAGT TGGGATTGGTATATTGAACCTTTGCTTCCATTGCAAATTCTCTCAGGCCTGCTATCAAAAAATACTCTTTTAATGTTGAC TAATTCTGGTCAAAGCGATTCTTTCTTTTTAGATTTAAATAGTAAAAAATTTACTTTCAATGTGAAGGTGGAGTTAGGAA ATAAATTTGATCAAGAACCTATTCCTTTATTTGTTCCTAAAAGACAACCTTTGCCAAATACGTCTAATTTTTATCGTCAT ATCATAAGACAGTGTCAAAGATTAATCCTTGGGCGTACTCATCCAACTATTATTTTAGTAGATGATTTGCAACTACGACT TCAGATAACTAGTGAACTAGCTGGAGAATTTGGATTGAGAGTCGTTCATGAAACTACTAATATTGAGACTAATGGGATTG TTTGTTGTAGTTGTAATTGGTGGATTGCTAATCAGTACAATTTACCAACGCCAGATCAATTGATTTTTCCAGTGATTCCA TTGCCTACTTTAGAATTACCTTGGATTGCGGCTAAAGTTGAAATGCTTAAGCATCAAGGTCGTGACTGGTTTCGAGAATT TCTTTTCCCAGAAACCCTTGTCATCCTTCTCAAATCGCTTGCTATCATTAGGGGGAAAGATGTTCGAGTCGCTATCCTTG ACGGCCGCATGCGCTATAGAAGTTGGGGAAAACTAATATTTGAAGCTCTTGAACCGTGGGTTGCTTTAGAGCGTTTGTTG CCTTATTAA
Upstream 100 bases:
>100_bases TTCAGATGGTTTTGTTTTAAGCTCCATAAATAGTATTGTTCTATATATTTATTGATAGGGCAATATGATTAAGAGATTTT TTTGATAAAAGGTCCTACTA
Downstream 100 bases:
>100_bases AATCAATCTCTTAGATTAAAAATTATTTTTTTTTATAATGGGAGAAGCACGACGAAGATCTGAGCAAGGCTTAAAACCTC GTAATAAAAAAAATTCTAGG
Product: Rad3-related DNA helicases
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MLEVNSHKHLKKYYQKNLALWPHNLTLTRLISRSLSRKDNTFIKLSSDSRNFWWPGLLIPLCLHNNKIVLILSERQYRRL FEVELPKLSSSRLGFDYVEGIELSPSDEKIWVLKYQDLIFANEKDLLKNRQLIFPESEFISSELRVSMSIKITPEDWENL IASHSRFEASIIEVHERLSRSLFNQSLRSDAVIRIDFRELLALKEILKDDLPSVMPWQRAFNVVNNGWVTWAKIDNQKLS WDWYIEPLLPLQILSGLLSKNTLLMLTNSGQSDSFFLDLNSKKFTFNVKVELGNKFDQEPIPLFVPKRQPLPNTSNFYRH IIRQCQRLILGRTHPTIILVDDLQLRLQITSELAGEFGLRVVHETTNIETNGIVCCSCNWWIANQYNLPTPDQLIFPVIP LPTLELPWIAAKVEMLKHQGRDWFREFLFPETLVILLKSLAIIRGKDVRVAILDGRMRYRSWGKLIFEALEPWVALERLL PY
Sequences:
>Translated_482_residues MLEVNSHKHLKKYYQKNLALWPHNLTLTRLISRSLSRKDNTFIKLSSDSRNFWWPGLLIPLCLHNNKIVLILSERQYRRL FEVELPKLSSSRLGFDYVEGIELSPSDEKIWVLKYQDLIFANEKDLLKNRQLIFPESEFISSELRVSMSIKITPEDWENL IASHSRFEASIIEVHERLSRSLFNQSLRSDAVIRIDFRELLALKEILKDDLPSVMPWQRAFNVVNNGWVTWAKIDNQKLS WDWYIEPLLPLQILSGLLSKNTLLMLTNSGQSDSFFLDLNSKKFTFNVKVELGNKFDQEPIPLFVPKRQPLPNTSNFYRH IIRQCQRLILGRTHPTIILVDDLQLRLQITSELAGEFGLRVVHETTNIETNGIVCCSCNWWIANQYNLPTPDQLIFPVIP LPTLELPWIAAKVEMLKHQGRDWFREFLFPETLVILLKSLAIIRGKDVRVAILDGRMRYRSWGKLIFEALEPWVALERLL PY >Mature_482_residues MLEVNSHKHLKKYYQKNLALWPHNLTLTRLISRSLSRKDNTFIKLSSDSRNFWWPGLLIPLCLHNNKIVLILSERQYRRL FEVELPKLSSSRLGFDYVEGIELSPSDEKIWVLKYQDLIFANEKDLLKNRQLIFPESEFISSELRVSMSIKITPEDWENL IASHSRFEASIIEVHERLSRSLFNQSLRSDAVIRIDFRELLALKEILKDDLPSVMPWQRAFNVVNNGWVTWAKIDNQKLS WDWYIEPLLPLQILSGLLSKNTLLMLTNSGQSDSFFLDLNSKKFTFNVKVELGNKFDQEPIPLFVPKRQPLPNTSNFYRH IIRQCQRLILGRTHPTIILVDDLQLRLQITSELAGEFGLRVVHETTNIETNGIVCCSCNWWIANQYNLPTPDQLIFPVIP LPTLELPWIAAKVEMLKHQGRDWFREFLFPETLVILLKSLAIIRGKDVRVAILDGRMRYRSWGKLIFEALEPWVALERLL PY
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56499; Mature: 56499
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVNSHKHLKKYYQKNLALWPHNLTLTRLISRSLSRKDNTFIKLSSDSRNFWWPGLLIP CCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEE LCLHNNKIVLILSERQYRRLFEVELPKLSSSRLGFDYVEGIELSPSDEKIWVLKYQDLIF EEECCCEEEEEECCHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEECEEE ANEKDLLKNRQLIFPESEFISSELRVSMSIKITPEDWENLIASHSRFEASIIEVHERLSR ECCHHHHCCCCEECCCHHHHCCCEEEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHH SLFNQSLRSDAVIRIDFRELLALKEILKDDLPSVMPWQRAFNVVNNGWVTWAKIDNQKLS HHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCEEC WDWYIEPLLPLQILSGLLSKNTLLMLTNSGQSDSFFLDLNSKKFTFNVKVELGNKFDQEP EEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCCCCCC IPLFVPKRQPLPNTSNFYRHIIRQCQRLILGRTHPTIILVDDLQLRLQITSELAGEFGLR CCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHHHHHHCCE VVHETTNIETNGIVCCSCNWWIANQYNLPTPDQLIFPVIPLPTLELPWIAAKVEMLKHQG EEEECCCCCCCCEEEEEECEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCC RDWFREFLFPETLVILLKSLAIIRGKDVRVAILDGRMRYRSWGKLIFEALEPWVALERLL HHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC PY CC >Mature Secondary Structure MLEVNSHKHLKKYYQKNLALWPHNLTLTRLISRSLSRKDNTFIKLSSDSRNFWWPGLLIP CCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEE LCLHNNKIVLILSERQYRRLFEVELPKLSSSRLGFDYVEGIELSPSDEKIWVLKYQDLIF EEECCCEEEEEECCHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEECEEE ANEKDLLKNRQLIFPESEFISSELRVSMSIKITPEDWENLIASHSRFEASIIEVHERLSR ECCHHHHCCCCEECCCHHHHCCCEEEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHH SLFNQSLRSDAVIRIDFRELLALKEILKDDLPSVMPWQRAFNVVNNGWVTWAKIDNQKLS HHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCEEC WDWYIEPLLPLQILSGLLSKNTLLMLTNSGQSDSFFLDLNSKKFTFNVKVELGNKFDQEP EEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCCCCCC IPLFVPKRQPLPNTSNFYRHIIRQCQRLILGRTHPTIILVDDLQLRLQITSELAGEFGLR CCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEHHHHHHHHCCE VVHETTNIETNGIVCCSCNWWIANQYNLPTPDQLIFPVIPLPTLELPWIAAKVEMLKHQG EEEECCCCCCCCEEEEEECEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCC RDWFREFLFPETLVILLKSLAIIRGKDVRVAILDGRMRYRSWGKLIFEALEPWVALERLL HHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC PY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA