| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026711
Identifier: 124026711
GI number: 124026711
Start: 1649726
End: 1650505
Strand: Direct
Name: 124026711
Synonym: NATL1_20061
Alternate gene names: NA
Gene position: 1649726-1650505 (Clockwise)
Preceding gene: 124026710
Following gene: 124026712
Centisome position: 88.47
GC content: 35.51
Gene sequence:
>780_bases GTGATAGAGAAACCTTTACTTGTACTGGATTTTGATGGTGTCATCGTTGATGGCATAAAGGAGTATTGGTCAAGTTCTCA TCAAACTTGTCTAAACATATGTCCTGCCAAAGAAAAAGAAATAATTTCTTTTTCTAGTGAGATTCCCGCAGCTTTTAAAA CCCTGAGACCCTGGGTTCATCATGGTTGGGAAATGGTTATCTTGGCTGCTGAATGTTCAGATAAAACTAGTCAACTAAAC TTAAAAGGTATTGAGAGTTTCTCAAAAAATTACTCAAAAGAATGTACTTCAGCACTTGATCGACGAGGTTGGACACCTTT TAAATTACAAGAAGCTTTAAATCAAACTAGAAGAGAAGCAATATCAAATAATTTCAATCAGTGGTTAAATTTGCATCAGC CTTTTTCTTTAGTCACTCAACGCCTCAAAAAACTTGAGAAGGAAGGCATTGAATTTGCTGTTTTAACAACAAAAAGTATC GAGTTCACAAAAAAACTTTTGGATAGTTTCGATCTTCAGCCAAAGCTTGTTTTCGGTCATGAATCAGGAAGCAAAGTCGA TGTCTTGAACCAACTCTTACAGAAAAGAATAATTCGAGGGTTTATTGAAGATCGTAGAACTACCTTAGAAAAAGTCTTGG AAGATAAAACCCTTGGATCTATCCCTTGTTACTTAGCAAGCTGGGGATACTTGAAACCTCAGGATCGAAATAATCTTCCT TCTGGTATTCAATTACTAAATTTAGATATTTTACAAGAACCTATCTCGAAGTGGTCTTGA
Upstream 100 bases:
>100_bases ATAGATCTGGAACAATGGGCCGTCGCCAAGTGGTAAGGCATCGGGTTTTGGTCTCGACATTCCTAGGTTCGAATCCTAGC GGCCCAGTTTTCAAGAATTA
Downstream 100 bases:
>100_bases CTTAATAGCGTACGTCTGTACTATCGGTTTAATTGCTATTCGTTGAGGAACTGAGTAATTCATCACCAATCCCAACGTCT TTTGTTATCCCTCTGAATTA
Product: phosphatases
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MIEKPLLVLDFDGVIVDGIKEYWSSSHQTCLNICPAKEKEIISFSSEIPAAFKTLRPWVHHGWEMVILAAECSDKTSQLN LKGIESFSKNYSKECTSALDRRGWTPFKLQEALNQTRREAISNNFNQWLNLHQPFSLVTQRLKKLEKEGIEFAVLTTKSI EFTKKLLDSFDLQPKLVFGHESGSKVDVLNQLLQKRIIRGFIEDRRTTLEKVLEDKTLGSIPCYLASWGYLKPQDRNNLP SGIQLLNLDILQEPISKWS
Sequences:
>Translated_259_residues MIEKPLLVLDFDGVIVDGIKEYWSSSHQTCLNICPAKEKEIISFSSEIPAAFKTLRPWVHHGWEMVILAAECSDKTSQLN LKGIESFSKNYSKECTSALDRRGWTPFKLQEALNQTRREAISNNFNQWLNLHQPFSLVTQRLKKLEKEGIEFAVLTTKSI EFTKKLLDSFDLQPKLVFGHESGSKVDVLNQLLQKRIIRGFIEDRRTTLEKVLEDKTLGSIPCYLASWGYLKPQDRNNLP SGIQLLNLDILQEPISKWS >Mature_259_residues MIEKPLLVLDFDGVIVDGIKEYWSSSHQTCLNICPAKEKEIISFSSEIPAAFKTLRPWVHHGWEMVILAAECSDKTSQLN LKGIESFSKNYSKECTSALDRRGWTPFKLQEALNQTRREAISNNFNQWLNLHQPFSLVTQRLKKLEKEGIEFAVLTTKSI EFTKKLLDSFDLQPKLVFGHESGSKVDVLNQLLQKRIIRGFIEDRRTTLEKVLEDKTLGSIPCYLASWGYLKPQDRNNLP SGIQLLNLDILQEPISKWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29738; Mature: 29738
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKPLLVLDFDGVIVDGIKEYWSSSHQTCLNICPAKEKEIISFSSEIPAAFKTLRPWVH CCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH HGWEMVILAAECSDKTSQLNLKGIESFSKNYSKECTSALDRRGWTPFKLQEALNQTRREA CCEEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ISNNFNQWLNLHQPFSLVTQRLKKLEKEGIEFAVLTTKSIEFTKKLLDSFDLQPKLVFGH HHCCHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC ESGSKVDVLNQLLQKRIIRGFIEDRRTTLEKVLEDKTLGSIPCYLASWGYLKPQDRNNLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC SGIQLLNLDILQEPISKWS CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEKPLLVLDFDGVIVDGIKEYWSSSHQTCLNICPAKEKEIISFSSEIPAAFKTLRPWVH CCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH HGWEMVILAAECSDKTSQLNLKGIESFSKNYSKECTSALDRRGWTPFKLQEALNQTRREA CCEEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ISNNFNQWLNLHQPFSLVTQRLKKLEKEGIEFAVLTTKSIEFTKKLLDSFDLQPKLVFGH HHCCHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEC ESGSKVDVLNQLLQKRIIRGFIEDRRTTLEKVLEDKTLGSIPCYLASWGYLKPQDRNNLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCC SGIQLLNLDILQEPISKWS CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA