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The map label for this gene is hycB

Identifier: 124026710

GI number: 124026710

Start: 1648436

End: 1649458

Strand: Direct

Name: hycB

Synonym: NATL1_20051

Alternate gene names: NA

Gene position: 1648436-1649458 (Clockwise)

Preceding gene: 124026709

Following gene: 124026711

Centisome position: 88.4

GC content: 41.06

Gene sequence:

>1023_bases
GTGATTAATCAAAATTCAACTTGCAATTCGGAAGCTCTCAAAAAAGGTAACTGGGTAAAATTAATCTGTGGTGCAAGTAA
TCAAGATTTACCTTCAATAAATGATCTTTGCTCAATTTATGGGGCTGCGGGGGTGCATTGCATTGACCTAGCTGCCGACG
AAGCTGTTGTCCATGCAGCTCGCAATGCTATTGATTGGGTTTTCGAAACTTATGGAAAAAAACCATGGCTGATGATCAGT
TTAAGTGATGGGAAAGATTCACATTTTCGCAAAGCTTGGTTTAATCCAGACCTATGTCCATCGAATTGCTTAAGACCCTG
TCAAAATAGTTGTCCGGCTCACGCGATTGAAAACTCAGGTGGTGTAAATGCTAAAAAATGCTATGGATGTGGTCGATGTA
TTGATACATGCCCTTTAGGAATTATTCAAGAAAAAGATCGAAGATTAACTCTGAGAGATTTCGCTCCTTTGTTAACCACT
ATCAAACCAGATGCAGTAGAAATTCATACTGCTCCAGGAAGAGGCAAAGAATTTGAAAAAACAATCAAGGAAATTTTCAA
AGCCGACCTGCAGCTAAAGCGATTATCTGTTAGTTGCGGTTTACAAGGACATGGAATAAACCATGAACAATTAGCAGAAG
AACTTTGGCTGCGACATAAATTCCTGAGAATTCATAATCAAAAACCTCTTTGGCAAATTGATGGGCGTCGAATGAGTGGA
GATCTCGGAGCAGGTGCGGCCAAAATCGCTGTAAAACTTTGGGAAAGATTACGCCCCATTGCTCCACCAGGCCCGTTGCA
ACTTGCTGGAGGGACTAATGAATCGACAATTAAGTACCTCCCAGAAATTAAAGGACCTGAAGGAATTGCTTTTGGAGGAA
AAGCAAGAAAGATAATCCAACCATGGCTAGAAGAAGCTCAACGAAAAGGAATTAGTCTTAGAGAATGGCCCGAAGGCTGG
GAGGCGGCTCTTTCAGAGGCAAAGCGACTAATAAATCCTTGGCTTGTAAGAAAATCTTTATAA

Upstream 100 bases:

>100_bases
GGAACCTCGTATAAAAATTGTTATTGAAATGGGTGGGGCTCGAAGTATTAAATGGCAACCATTAAATGAATTCATTAATA
AGGATTAGAAATTCATCAAG

Downstream 100 bases:

>100_bases
TTGATTTTTTCTAGCTAAATCAATCATTCGAAAGCCCAAGTCGAGCTTTAATAATGAATAAATTTTCCGATTAACTAAAA
AAAACTGGATAAAGACATGA

Product: Fe-S-cluster-containing hydrogenase components 2

Products: NA

Alternate protein names: LdpA Protein; Alpha-Helical Ferredoxin; Ferredoxin; 4Fe-4S Ferredoxin; Light Dependent Period; Ferredoxin 4Fe-4S Type

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MINQNSTCNSEALKKGNWVKLICGASNQDLPSINDLCSIYGAAGVHCIDLAADEAVVHAARNAIDWVFETYGKKPWLMIS
LSDGKDSHFRKAWFNPDLCPSNCLRPCQNSCPAHAIENSGGVNAKKCYGCGRCIDTCPLGIIQEKDRRLTLRDFAPLLTT
IKPDAVEIHTAPGRGKEFEKTIKEIFKADLQLKRLSVSCGLQGHGINHEQLAEELWLRHKFLRIHNQKPLWQIDGRRMSG
DLGAGAAKIAVKLWERLRPIAPPGPLQLAGGTNESTIKYLPEIKGPEGIAFGGKARKIIQPWLEEAQRKGISLREWPEGW
EAALSEAKRLINPWLVRKSL

Sequences:

>Translated_340_residues
MINQNSTCNSEALKKGNWVKLICGASNQDLPSINDLCSIYGAAGVHCIDLAADEAVVHAARNAIDWVFETYGKKPWLMIS
LSDGKDSHFRKAWFNPDLCPSNCLRPCQNSCPAHAIENSGGVNAKKCYGCGRCIDTCPLGIIQEKDRRLTLRDFAPLLTT
IKPDAVEIHTAPGRGKEFEKTIKEIFKADLQLKRLSVSCGLQGHGINHEQLAEELWLRHKFLRIHNQKPLWQIDGRRMSG
DLGAGAAKIAVKLWERLRPIAPPGPLQLAGGTNESTIKYLPEIKGPEGIAFGGKARKIIQPWLEEAQRKGISLREWPEGW
EAALSEAKRLINPWLVRKSL
>Mature_340_residues
MINQNSTCNSEALKKGNWVKLICGASNQDLPSINDLCSIYGAAGVHCIDLAADEAVVHAARNAIDWVFETYGKKPWLMIS
LSDGKDSHFRKAWFNPDLCPSNCLRPCQNSCPAHAIENSGGVNAKKCYGCGRCIDTCPLGIIQEKDRRLTLRDFAPLLTT
IKPDAVEIHTAPGRGKEFEKTIKEIFKADLQLKRLSVSCGLQGHGINHEQLAEELWLRHKFLRIHNQKPLWQIDGRRMSG
DLGAGAAKIAVKLWERLRPIAPPGPLQLAGGTNESTIKYLPEIKGPEGIAFGGKARKIIQPWLEEAQRKGISLREWPEGW
EAALSEAKRLINPWLVRKSL

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37766; Mature: 37766

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQNSTCNSEALKKGNWVKLICGASNQDLPSINDLCSIYGAAGVHCIDLAADEAVVHAA
CCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHH
RNAIDWVFETYGKKPWLMISLSDGKDSHFRKAWFNPDLCPSNCLRPCQNSCPAHAIENSG
HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
GVNAKKCYGCGRCIDTCPLGIIQEKDRRLTLRDFAPLLTTIKPDAVEIHTAPGRGKEFEK
CCCHHHHHCCCCHHHHCCCCCEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCHHHHH
TIKEIFKADLQLKRLSVSCGLQGHGINHEQLAEELWLRHKFLRIHNQKPLWQIDGRRMSG
HHHHHHHHHHHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECC
DLGAGAAKIAVKLWERLRPIAPPGPLQLAGGTNESTIKYLPEIKGPEGIAFGGKARKIIQ
CCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEECCHHHHHHH
PWLEEAQRKGISLREWPEGWEAALSEAKRLINPWLVRKSL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINQNSTCNSEALKKGNWVKLICGASNQDLPSINDLCSIYGAAGVHCIDLAADEAVVHAA
CCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHH
RNAIDWVFETYGKKPWLMISLSDGKDSHFRKAWFNPDLCPSNCLRPCQNSCPAHAIENSG
HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
GVNAKKCYGCGRCIDTCPLGIIQEKDRRLTLRDFAPLLTTIKPDAVEIHTAPGRGKEFEK
CCCHHHHHCCCCHHHHCCCCCEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCHHHHH
TIKEIFKADLQLKRLSVSCGLQGHGINHEQLAEELWLRHKFLRIHNQKPLWQIDGRRMSG
HHHHHHHHHHHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECC
DLGAGAAKIAVKLWERLRPIAPPGPLQLAGGTNESTIKYLPEIKGPEGIAFGGKARKIIQ
CCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEECCHHHHHHH
PWLEEAQRKGISLREWPEGWEAALSEAKRLINPWLVRKSL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA