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The map label for this gene is ureF [H]

Identifier: 124026626

GI number: 124026626

Start: 1581251

End: 1581922

Strand: Reverse

Name: ureF [H]

Synonym: NATL1_19211

Alternate gene names: 124026626

Gene position: 1581922-1581251 (Counterclockwise)

Preceding gene: 124026627

Following gene: 124026625

Centisome position: 84.83

GC content: 37.35

Gene sequence:

>672_bases
ATGAAACTTGAGTTTTTACAATTAATCAGCCCATCATTACCAGTTGGTGCTTTTAGTTACTCTGAAGGATTGGAGTGGCT
TGTTCAAAATACAAAAGTATATGACGAGACAACACTGTTTAATTGGATTGAAAGTGAACTCTCTCGAGGCCAGATAACAA
TTGAGGCAAGCTCAATTGCTCACATTATGAGAGATTTGGAGAATTGGAATGATCACAAAGATGATCAACATAAATTAATT
ATTGAAGAGTGGAATTCTTGGCTTGGTTCATTAAGAGATTCGCCAGATGTCAGATCTCAACAAATACAAATGGGTGAATC
TTTATTACAGCTTCTCATTGATCTAGATCATCCTCTTCCTGGTAATGAAAAAAATTTTATTTGGCCGATAGCCTGGGCTT
GGGCCGGAGTTTGCTGGGATATACCCCAAATGGATTTAGTGGAAGGATTTTTATATAGTTGGGTGGCTAATCAATTGAGT
GCAGCGTTAAGACTATTGTCATTAGGACCGACAAAAGCTCAACAGCTTCAAAAGAAATCCCTAAGACTTATAAAGTCTCA
AGCAAATTACTTATTGCAGCAGAATCCCAAAGAAATTTGGGTTGGTGATGTCGGCGCGATTATGGCACAACAATCGCATA
TTGAACTTTATTCAAGATTATTTCGAAGCTAA

Upstream 100 bases:

>100_bases
ACAAAATGTTAGAAGGCCGTGGTTTTGAAATAGAAAGTTTTCAAAGACCTTTTTTCCCTGAGACAGGCGCTTATGAGTAG
GGATTTGATCTATTCCGTTT

Downstream 100 bases:

>100_bases
TGGAAAGTAAATTAAGAGTTGGTATAGCCGGTCCAGTAGGATCTGGTAAAACGGCTATTATTCAGAGACTATGTGAAAAC
CTTAAAGATCGATTAGAGAT

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKLEFLQLISPSLPVGAFSYSEGLEWLVQNTKVYDETTLFNWIESELSRGQITIEASSIAHIMRDLENWNDHKDDQHKLI
IEEWNSWLGSLRDSPDVRSQQIQMGESLLQLLIDLDHPLPGNEKNFIWPIAWAWAGVCWDIPQMDLVEGFLYSWVANQLS
AALRLLSLGPTKAQQLQKKSLRLIKSQANYLLQQNPKEIWVGDVGAIMAQQSHIELYSRLFRS

Sequences:

>Translated_223_residues
MKLEFLQLISPSLPVGAFSYSEGLEWLVQNTKVYDETTLFNWIESELSRGQITIEASSIAHIMRDLENWNDHKDDQHKLI
IEEWNSWLGSLRDSPDVRSQQIQMGESLLQLLIDLDHPLPGNEKNFIWPIAWAWAGVCWDIPQMDLVEGFLYSWVANQLS
AALRLLSLGPTKAQQLQKKSLRLIKSQANYLLQQNPKEIWVGDVGAIMAQQSHIELYSRLFRS
>Mature_223_residues
MKLEFLQLISPSLPVGAFSYSEGLEWLVQNTKVYDETTLFNWIESELSRGQITIEASSIAHIMRDLENWNDHKDDQHKLI
IEEWNSWLGSLRDSPDVRSQQIQMGESLLQLLIDLDHPLPGNEKNFIWPIAWAWAGVCWDIPQMDLVEGFLYSWVANQLS
AALRLLSLGPTKAQQLQKKSLRLIKSQANYLLQQNPKEIWVGDVGAIMAQQSHIELYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25704; Mature: 25704

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEFLQLISPSLPVGAFSYSEGLEWLVQNTKVYDETTLFNWIESELSRGQITIEASSIA
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHH
HIMRDLENWNDHKDDQHKLIIEEWNSWLGSLRDSPDVRSQQIQMGESLLQLLIDLDHPLP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GNEKNFIWPIAWAWAGVCWDIPQMDLVEGFLYSWVANQLSAALRLLSLGPTKAQQLQKKS
CCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LRLIKSQANYLLQQNPKEIWVGDVGAIMAQQSHIELYSRLFRS
HHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLEFLQLISPSLPVGAFSYSEGLEWLVQNTKVYDETTLFNWIESELSRGQITIEASSIA
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHH
HIMRDLENWNDHKDDQHKLIIEEWNSWLGSLRDSPDVRSQQIQMGESLLQLLIDLDHPLP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GNEKNFIWPIAWAWAGVCWDIPQMDLVEGFLYSWVANQLSAALRLLSLGPTKAQQLQKKS
CCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LRLIKSQANYLLQQNPKEIWVGDVGAIMAQQSHIELYSRLFRS
HHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA