| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is ureE [H]
Identifier: 124026627
GI number: 124026627
Start: 1581943
End: 1582383
Strand: Reverse
Name: ureE [H]
Synonym: NATL1_19221
Alternate gene names: 124026627
Gene position: 1582383-1581943 (Counterclockwise)
Preceding gene: 124026632
Following gene: 124026626
Centisome position: 84.86
GC content: 35.6
Gene sequence:
>441_bases TTGTCACAGGAATTAATCTATCTCACCGAGAGAATTAGTGCTCAAGTGATAAAACATAGCCTTTTACTTCCCTTGTCTGC AAAAGAGAGGACTCAGCTTCGAGGTAAACGATCAACTTTAAATGGAATTGATGTCATTTTAAATTTGCCTCGAGGAGGAG GTCGCTTGATTCCTGGAGAGGTTTTGAAAAGTGAGAATTCAAAAGTTTTTGTAAGCATAGTGGCTGCTCACGAAGATTTA ATAAGAATTAGCTCAGAAAATAGATTGAAATTATTAAAAGCTGCTTATCATTTAGGTAATAGACATGTTGAGATTGAACT GCACGATAAAGAGTTATATTTACTCAATGATGTAGTAATGAACAAAATGTTAGAAGGCCGTGGTTTTGAAATAGAAAGTT TTCAAAGACCTTTTTTCCCTGAGACAGGCGCTTATGAGTAG
Upstream 100 bases:
>100_bases AATAGCTTTATCGTTTGTGCTTATTTAGTTTTGAGAAAATAATAAATGTCTGATCTGGCAGACATAACCTATAAAATTTA GGTCTACAAAGAATTTAAGC
Downstream 100 bases:
>100_bases GGATTTGATCTATTCCGTTTATGAAACTTGAGTTTTTACAATTAATCAGCCCATCATTACCAGTTGGTGCTTTTAGTTAC TCTGAAGGATTGGAGTGGCT
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSQELIYLTERISAQVIKHSLLLPLSAKERTQLRGKRSTLNGIDVILNLPRGGGRLIPGEVLKSENSKVFVSIVAAHEDL IRISSENRLKLLKAAYHLGNRHVEIELHDKELYLLNDVVMNKMLEGRGFEIESFQRPFFPETGAYE
Sequences:
>Translated_146_residues MSQELIYLTERISAQVIKHSLLLPLSAKERTQLRGKRSTLNGIDVILNLPRGGGRLIPGEVLKSENSKVFVSIVAAHEDL IRISSENRLKLLKAAYHLGNRHVEIELHDKELYLLNDVVMNKMLEGRGFEIESFQRPFFPETGAYE >Mature_145_residues SQELIYLTERISAQVIKHSLLLPLSAKERTQLRGKRSTLNGIDVILNLPRGGGRLIPGEVLKSENSKVFVSIVAAHEDLI RISSENRLKLLKAAYHLGNRHVEIELHDKELYLLNDVVMNKMLEGRGFEIESFQRPFFPETGAYE
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 16609; Mature: 16477
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQELIYLTERISAQVIKHSLLLPLSAKERTQLRGKRSTLNGIDVILNLPRGGGRLIPGE CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCEECCHH VLKSENSKVFVSIVAAHEDLIRISSENRLKLLKAAYHLGNRHVEIELHDKELYLLNDVVM HHCCCCCEEEEEEEECCCHHEEECCCCHHHHHHHHHHCCCEEEEEEECCCEEEHHHHHHH NKMLEGRGFEIESFQRPFFPETGAYE HHHHCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure SQELIYLTERISAQVIKHSLLLPLSAKERTQLRGKRSTLNGIDVILNLPRGGGRLIPGE CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCEECCHH VLKSENSKVFVSIVAAHEDLIRISSENRLKLLKAAYHLGNRHVEIELHDKELYLLNDVVM HHCCCCCEEEEEEEECCCHHEEECCCCHHHHHHHHHHCCCEEEEEEECCCEEEHHHHHHH NKMLEGRGFEIESFQRPFFPETGAYE HHHHCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]