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The map label for this gene is ccdA

Identifier: 124026563

GI number: 124026563

Start: 1517728

End: 1518468

Strand: Direct

Name: ccdA

Synonym: NATL1_18581

Alternate gene names: NA

Gene position: 1517728-1518468 (Clockwise)

Preceding gene: 124026562

Following gene: 124026564

Centisome position: 81.39

GC content: 37.38

Gene sequence:

>741_bases
GTGGCAAATCTCTTTTTGAACATTTCTTCTATAAGTTTAATTTTCTCTGATTTGACTCGTCATGGCGAGCAGCTAATTAA
TAATGGGCTCAATAATCCAACTCCCCTAACAATTCTGATAGTTTTCTCCGGAGGGCTTTTGACTAGCTTAGGTCCCTGTT
CACTGTCACTTTTACCAATCACAGTTGCATATTTAGCTGGATTTAAAAATAACCAAAACCCTCTACAAAAAACGATTAGT
TTCTGTAGCGGTATAGTTTTTTCACTAGTGGTATTAGGAAGTCTAAGCGGGTTTTTAGGAAAAATTTATGGTCAATTACC
AGGTTTCTTCTCAATATTCATTAGTTTTTTAGCAATAATTATGGGTCTTAATCTGCTTGGGATTTTGAAATTCTCACTTC
CATCTGGTCCTGACCCTGAAATTTGGAAAAACAAAGTTCCTTCCGCATTCGCACCAGTTTCAGCAGGTTTTGCTTTTGGA
TTAGCCTCATCGCCTTGCACTACTCCTGTTCTTGCAGTTCTTCTCGCTTGGGTTGCTAAACAAGGAAATCCTCTAAGCGG
CACAATTTTTCTTGGAAGTTTTGCAATTGGACAAATTGTTCCTTTATTTGTAGCAGGTACATTTGCAGCAAGTATTCCAA
AATTATTATCGTTGCGACCTATTGGAAAATGGGTTCCACCAATTAGCGGAGTAATTTTGTTAACCATAGGTCTCATAAGC
CTTCTTTCTATTTGGATATAA

Upstream 100 bases:

>100_bases
GCTGCCCTATTGGTCAGATCCTCTATTGAATCTTCAGAATTATTAATTAAAAATCCCTCAAATAGACTTTTAGCTAGATA
ATCTGGAAGAAGAACTTAGA

Downstream 100 bases:

>100_bases
AATAGATGAAAAAAATCAGCCAAGTTTTAAACTGGCTTTCTAGTTTAAAAATTGCGATATTACTATTATTATTAATAGCT
ATTTCATGCGCAGCCGGGAC

Product: putative c-type cytochrome biogenesis protein CcdA

Products: NA

Alternate protein names: C-Type Cytochrome Biogenesis Protein CcdA; C-Type Cytochrome Biogenesis Protein; Cytochrome C Biogenesis Protein; Cytochrome C Biogenesis Membrane Protein; Cytochrome C Biogenesis Protein-Like; CytoChrome C Biogenesis Protein; ThiolDisulfide Interchange Protein; C-Type Cytochrome Biogenesis; ThiolDisulfide Interchange Protein DsbD

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MANLFLNISSISLIFSDLTRHGEQLINNGLNNPTPLTILIVFSGGLLTSLGPCSLSLLPITVAYLAGFKNNQNPLQKTIS
FCSGIVFSLVVLGSLSGFLGKIYGQLPGFFSIFISFLAIIMGLNLLGILKFSLPSGPDPEIWKNKVPSAFAPVSAGFAFG
LASSPCTTPVLAVLLAWVAKQGNPLSGTIFLGSFAIGQIVPLFVAGTFAASIPKLLSLRPIGKWVPPISGVILLTIGLIS
LLSIWI

Sequences:

>Translated_246_residues
MANLFLNISSISLIFSDLTRHGEQLINNGLNNPTPLTILIVFSGGLLTSLGPCSLSLLPITVAYLAGFKNNQNPLQKTIS
FCSGIVFSLVVLGSLSGFLGKIYGQLPGFFSIFISFLAIIMGLNLLGILKFSLPSGPDPEIWKNKVPSAFAPVSAGFAFG
LASSPCTTPVLAVLLAWVAKQGNPLSGTIFLGSFAIGQIVPLFVAGTFAASIPKLLSLRPIGKWVPPISGVILLTIGLIS
LLSIWI
>Mature_245_residues
ANLFLNISSISLIFSDLTRHGEQLINNGLNNPTPLTILIVFSGGLLTSLGPCSLSLLPITVAYLAGFKNNQNPLQKTISF
CSGIVFSLVVLGSLSGFLGKIYGQLPGFFSIFISFLAIIMGLNLLGILKFSLPSGPDPEIWKNKVPSAFAPVSAGFAFGL
ASSPCTTPVLAVLLAWVAKQGNPLSGTIFLGSFAIGQIVPLFVAGTFAASIPKLLSLRPIGKWVPPISGVILLTIGLISL
LSIWI

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25842; Mature: 25711

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00175 PG_MUTASE ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLFLNISSISLIFSDLTRHGEQLINNGLNNPTPLTILIVFSGGLLTSLGPCSLSLLPI
CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCCCHHHHHHH
TVAYLAGFKNNQNPLQKTISFCSGIVFSLVVLGSLSGFLGKIYGQLPGFFSIFISFLAII
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MGLNLLGILKFSLPSGPDPEIWKNKVPSAFAPVSAGFAFGLASSPCTTPVLAVLLAWVAK
HHHHHHHHHHHCCCCCCCCHHHHHCCCCHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
QGNPLSGTIFLGSFAIGQIVPLFVAGTFAASIPKLLSLRPIGKWVPPISGVILLTIGLIS
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LLSIWI
HHHHCC
>Mature Secondary Structure 
ANLFLNISSISLIFSDLTRHGEQLINNGLNNPTPLTILIVFSGGLLTSLGPCSLSLLPI
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCCCHHHHHHH
TVAYLAGFKNNQNPLQKTISFCSGIVFSLVVLGSLSGFLGKIYGQLPGFFSIFISFLAII
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MGLNLLGILKFSLPSGPDPEIWKNKVPSAFAPVSAGFAFGLASSPCTTPVLAVLLAWVAK
HHHHHHHHHHHCCCCCCCCHHHHHCCCCHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
QGNPLSGTIFLGSFAIGQIVPLFVAGTFAASIPKLLSLRPIGKWVPPISGVILLTIGLIS
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LLSIWI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA