| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is flbA [H]
Identifier: 124026526
GI number: 124026526
Start: 1485867
End: 1487678
Strand: Direct
Name: flbA [H]
Synonym: NATL1_18211
Alternate gene names: 124026526
Gene position: 1485867-1487678 (Clockwise)
Preceding gene: 124026525
Following gene: 124026527
Centisome position: 79.68
GC content: 32.73
Gene sequence:
>1812_bases ATGGATGGACCTCATATAGAAGAGAACGGAAAGAAAAAAGTAACTGAAGGAAAAACATTCCCAGTTCCATTTAATTTAGA AGAGCTTAATAAAAAAAGATCTATTACCACGAAGACTTCTTATAAACCTTCTAAAGAACAAATCATTAATCAAGCATTTA AATTTCATTCACAAGGAAACATTTCAGAAGCAGCAAAATATTATCAATATTGCATAAATCAAGCATTCAAGGATTACAGA GTCTTTACTAATTATGGAGTCATTTTAAAAAAATTTGGAAAATTGAAAGAAGCAGAAAAATGTCAACGCGAAGCAATTCA AATTAATCCTAATTTCGCAGAAGCATATTCCAATCTAGGTAATATATTGAGTGATCTTGGTCAATTAAAAGAAGCAGAGT TATCCTTTCGCAAAGCCATTGAAATCAAATCTGATTACGCAGAAGCACATTCAAATCTAGGTAATATATTGAGAGATTTT GGTCAATTAAAAGAAGCAGAGTTATCCTTTCGCAAAGCTATTGAAATCAAATCTGATTACGCAGAAGCACATTCAAATCT AGGTAATATATTGAATGATCTTGGTCAATTAAAAGAAGCAGAGTTATCCTTTCGCAAAGCTATTGAAATTAAACCTGATT TCGCAAATACTCATAATAATCTAGGAATCATATTGAGTGATCTTGATCAATTAAAAGAAGCAGAGTTATCCTTTCGCAAA GCTATTGAAATCAAACCTGATTTCATAAAAGCATACTCAAATCTTGGGAACATATTGAGAGATCTTGGTCAATTAAAAGA AGCAGAGTTATCCTTTCGCAAAGCTATTAAAATCAAACCTGATTACGCAGAAGCTTATTTCAACCTTGCTTACTTAGAGC TGCTAAAAGGCAATTATAAATCTGGACTAAAGAACTATGAGTTTAGGTTCAAAAAAAAGCAACCTACTGTTCCTCACATC AAAACAAAATTGAAAAGAGTCACTAATGAACAATTCCAAAAAGGAGAGAAACTTTTAGTTGTTAGTGAGCAAGGTTTAGG AGATACTCTACAATATATGCGATACATACCATATCTGCAAAATCAAGGTTTTGATATTAATTTTTGTGCCCAGACACAAC TCCATTCATTGATCAAAGCATCAGCTATAAGTGCAGATCCATTAATAACAGAACAAGCAAATCAACTTTCACTAGGACAA TGGATACCATTATTATCCTTACCTAAATATCTACAAGTAAGCCCAAATAATCCAATCATCTCAGAACCATATATTAACTC CACAGATAATCTAACAAAGAAGTGGAAAAAGATACTCTCTAAAGAAAAAAGAGCAGTCATTGGTATTAATTGGCAAGGTA ATCCAACAATGGAAAAAAGTTTTTATCAAGGGCGGTCAATACCTCTCGAAATATTTTCAATCCTTCCTGAACATAATGAA ATCACAATGCTCTCATTACAAAAAGGATTTGGATCGGAACAATTAGAGAATTGCTCTTTCAAAAATAAATTTGTTAGCTG CCAATCAGAAATTGATTCCACTTGGGATTTTTTAGAAAATGCTGCCATTATTGATAACTGTGATTTAATTATTACTTGCG ATACTTCGATTGCTCATTTAGCTGGAGGGATGGGAAAGAAAGTTTGGTTACTTTTAAGAGATATCCCTTATTGGACTTGG GGACTTGACGGGGAAACTACATTTTGGTATCCATCGATGAGATTATTTCGACAAAATAAACGTCACAATTGGCAAGAGGT TATGGAGAGAGTATCAAGCGCACTTGAAAAAGAAATTGAGGCAAAAGTATGA
Upstream 100 bases:
>100_bases TAATTTACAATAAAATCAAAACTTAATAATTTTACCAAAAAGATAAAACAAGAATTCAAATTAGTAGTACAATCATTTAA ATCAAAGTAAAAAAGAAGAA
Downstream 100 bases:
>100_bases GTTCAAAAATTAAAAACCTATCTTCTATCATTGCTCCAATATCTTTAGGAGAACTAATCGATAAAATCACAATTCTAGAA ATCAAACAAATACATATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MDGPHIEENGKKKVTEGKTFPVPFNLEELNKKRSITTKTSYKPSKEQIINQAFKFHSQGNISEAAKYYQYCINQAFKDYR VFTNYGVILKKFGKLKEAEKCQREAIQINPNFAEAYSNLGNILSDLGQLKEAELSFRKAIEIKSDYAEAHSNLGNILRDF GQLKEAELSFRKAIEIKSDYAEAHSNLGNILNDLGQLKEAELSFRKAIEIKPDFANTHNNLGIILSDLDQLKEAELSFRK AIEIKPDFIKAYSNLGNILRDLGQLKEAELSFRKAIKIKPDYAEAYFNLAYLELLKGNYKSGLKNYEFRFKKKQPTVPHI KTKLKRVTNEQFQKGEKLLVVSEQGLGDTLQYMRYIPYLQNQGFDINFCAQTQLHSLIKASAISADPLITEQANQLSLGQ WIPLLSLPKYLQVSPNNPIISEPYINSTDNLTKKWKKILSKEKRAVIGINWQGNPTMEKSFYQGRSIPLEIFSILPEHNE ITMLSLQKGFGSEQLENCSFKNKFVSCQSEIDSTWDFLENAAIIDNCDLIITCDTSIAHLAGGMGKKVWLLLRDIPYWTW GLDGETTFWYPSMRLFRQNKRHNWQEVMERVSSALEKEIEAKV
Sequences:
>Translated_603_residues MDGPHIEENGKKKVTEGKTFPVPFNLEELNKKRSITTKTSYKPSKEQIINQAFKFHSQGNISEAAKYYQYCINQAFKDYR VFTNYGVILKKFGKLKEAEKCQREAIQINPNFAEAYSNLGNILSDLGQLKEAELSFRKAIEIKSDYAEAHSNLGNILRDF GQLKEAELSFRKAIEIKSDYAEAHSNLGNILNDLGQLKEAELSFRKAIEIKPDFANTHNNLGIILSDLDQLKEAELSFRK AIEIKPDFIKAYSNLGNILRDLGQLKEAELSFRKAIKIKPDYAEAYFNLAYLELLKGNYKSGLKNYEFRFKKKQPTVPHI KTKLKRVTNEQFQKGEKLLVVSEQGLGDTLQYMRYIPYLQNQGFDINFCAQTQLHSLIKASAISADPLITEQANQLSLGQ WIPLLSLPKYLQVSPNNPIISEPYINSTDNLTKKWKKILSKEKRAVIGINWQGNPTMEKSFYQGRSIPLEIFSILPEHNE ITMLSLQKGFGSEQLENCSFKNKFVSCQSEIDSTWDFLENAAIIDNCDLIITCDTSIAHLAGGMGKKVWLLLRDIPYWTW GLDGETTFWYPSMRLFRQNKRHNWQEVMERVSSALEKEIEAKV >Mature_603_residues MDGPHIEENGKKKVTEGKTFPVPFNLEELNKKRSITTKTSYKPSKEQIINQAFKFHSQGNISEAAKYYQYCINQAFKDYR VFTNYGVILKKFGKLKEAEKCQREAIQINPNFAEAYSNLGNILSDLGQLKEAELSFRKAIEIKSDYAEAHSNLGNILRDF GQLKEAELSFRKAIEIKSDYAEAHSNLGNILNDLGQLKEAELSFRKAIEIKPDFANTHNNLGIILSDLDQLKEAELSFRK AIEIKPDFIKAYSNLGNILRDLGQLKEAELSFRKAIKIKPDYAEAYFNLAYLELLKGNYKSGLKNYEFRFKKKQPTVPHI KTKLKRVTNEQFQKGEKLLVVSEQGLGDTLQYMRYIPYLQNQGFDINFCAQTQLHSLIKASAISADPLITEQANQLSLGQ WIPLLSLPKYLQVSPNNPIISEPYINSTDNLTKKWKKILSKEKRAVIGINWQGNPTMEKSFYQGRSIPLEIFSILPEHNE ITMLSLQKGFGSEQLENCSFKNKFVSCQSEIDSTWDFLENAAIIDNCDLIITCDTSIAHLAGGMGKKVWLLLRDIPYWTW GLDGETTFWYPSMRLFRQNKRHNWQEVMERVSSALEKEIEAKV
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=261, Percent_Identity=33.3333333333333, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI32307150, Length=261, Percent_Identity=33.3333333333333, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI118766328, Length=232, Percent_Identity=34.051724137931, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI118766330, Length=232, Percent_Identity=34.051724137931, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI301336134, Length=269, Percent_Identity=29.7397769516729, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI83415184, Length=269, Percent_Identity=29.7397769516729, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI22749211, Length=223, Percent_Identity=30.9417040358744, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI224809432, Length=261, Percent_Identity=27.2030651340996, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI170784867, Length=306, Percent_Identity=24.5098039215686, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115532690, Length=261, Percent_Identity=32.9501915708812, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI115532692, Length=261, Percent_Identity=32.9501915708812, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI25147174, Length=214, Percent_Identity=26.6355140186916, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193210476, Length=207, Percent_Identity=27.0531400966184, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319387, Length=183, Percent_Identity=27.3224043715847, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI17647755, Length=249, Percent_Identity=37.3493975903614, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24585827, Length=249, Percent_Identity=37.3493975903614, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24585829, Length=249, Percent_Identity=37.3493975903614, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI161076610, Length=216, Percent_Identity=28.2407407407407, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI19920486, Length=216, Percent_Identity=28.2407407407407, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI24656717, Length=251, Percent_Identity=27.0916334661355, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI18110006, Length=251, Percent_Identity=27.0916334661355, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI281364285, Length=225, Percent_Identity=29.3333333333333, Blast_Score=90, Evalue=6e-18, Organism=Drosophila melanogaster, GI24581187, Length=225, Percent_Identity=29.3333333333333, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24647123, Length=224, Percent_Identity=26.7857142857143, Blast_Score=86, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69159; Mature: 69159
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGPHIEENGKKKVTEGKTFPVPFNLEELNKKRSITTKTSYKPSKEQIINQAFKFHSQGN CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC ISEAAKYYQYCINQAFKDYRVFTNYGVILKKFGKLKEAEKCQREAIQINPNFAEAYSNLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHHHHH NILSDLGQLKEAELSFRKAIEIKSDYAEAHSNLGNILRDFGQLKEAELSFRKAIEIKSDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAHSNLGNILNDLGQLKEAELSFRKAIEIKPDFANTHNNLGIILSDLDQLKEAELSFRK HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHH AIEIKPDFIKAYSNLGNILRDLGQLKEAELSFRKAIKIKPDYAEAYFNLAYLELLKGNYK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCHH SGLKNYEFRFKKKQPTVPHIKTKLKRVTNEQFQKGEKLLVVSEQGLGDTLQYMRYIPYLQ CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH NQGFDINFCAQTQLHSLIKASAISADPLITEQANQLSLGQWIPLLSLPKYLQVSPNNPII CCCCCEEEEHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCHHCCCCCEEECCCCCCC SEPYINSTDNLTKKWKKILSKEKRAVIGINWQGNPTMEKSFYQGRSIPLEIFSILPEHNE CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHCCCCCC ITMLSLQKGFGSEQLENCSFKNKFVSCQSEIDSTWDFLENAAIIDNCDLIITCDTSIAHL EEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCHHHHH AGGMGKKVWLLLRDIPYWTWGLDGETTFWYPSMRLFRQNKRHNWQEVMERVSSALEKEIE HCCCCHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AKV CCC >Mature Secondary Structure MDGPHIEENGKKKVTEGKTFPVPFNLEELNKKRSITTKTSYKPSKEQIINQAFKFHSQGN CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC ISEAAKYYQYCINQAFKDYRVFTNYGVILKKFGKLKEAEKCQREAIQINPNFAEAYSNLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHHHHH NILSDLGQLKEAELSFRKAIEIKSDYAEAHSNLGNILRDFGQLKEAELSFRKAIEIKSDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAHSNLGNILNDLGQLKEAELSFRKAIEIKPDFANTHNNLGIILSDLDQLKEAELSFRK HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHH AIEIKPDFIKAYSNLGNILRDLGQLKEAELSFRKAIKIKPDYAEAYFNLAYLELLKGNYK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCHH SGLKNYEFRFKKKQPTVPHIKTKLKRVTNEQFQKGEKLLVVSEQGLGDTLQYMRYIPYLQ CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH NQGFDINFCAQTQLHSLIKASAISADPLITEQANQLSLGQWIPLLSLPKYLQVSPNNPII CCCCCEEEEHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCHHCCCCCEEECCCCCCC SEPYINSTDNLTKKWKKILSKEKRAVIGINWQGNPTMEKSFYQGRSIPLEIFSILPEHNE CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHCCCCCC ITMLSLQKGFGSEQLENCSFKNKFVSCQSEIDSTWDFLENAAIIDNCDLIITCDTSIAHL EEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCHHHHH AGGMGKKVWLLLRDIPYWTWGLDGETTFWYPSMRLFRQNKRHNWQEVMERVSSALEKEIE HCCCCHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AKV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]