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The map label for this gene is 124026525

Identifier: 124026525

GI number: 124026525

Start: 1484472

End: 1485764

Strand: Direct

Name: 124026525

Synonym: NATL1_18201

Alternate gene names: NA

Gene position: 1484472-1485764 (Clockwise)

Preceding gene: 124026524

Following gene: 124026526

Centisome position: 79.61

GC content: 28.46

Gene sequence:

>1293_bases
ATGGAATCTAGTGATGAAGATCAAGGGGAAAAGAATAAACCTCAAGTCCAAATATTTACTGTTCCATTTACTTTAGGTGA
AATCAAAGAAAATATTAATATTAATATTAATACTCCTTCTAAACCTTCTAAAGAGCAAATCATTAATCAAGCATTTAAAT
TTCATTCACAAGGAAACATTTCAGAAGCAGCAAAATATTATCAATATTGCATAAATCAAGCATTCAAAGATTACAGAGTC
TTTACTAATTATGGAGTCATTTTAAAAAAATTTGGAAAATTGCAAGAAGCAGAAAAATTTCAACGCGAAGCAATTCAAAT
TAATCCTAATTTCGCAGAAGCATATTCCAATCTAGGTAATATATTGAGAGATCTTGGCCAATTAAAAGAAGCAGAGTTAT
CCTTTCGCAAAGCTATTGAAATCAAATCTGATTACGCAGAAGCATATTCCAATCTAGGTAATATATTGAGAGATCTTGGT
CAATTAAAAGAAGCAGAGTTATCCTTTCGCAAAGCTATTGAAATCAAACCTGATTACGCAGAAGCACATTCCAATCTAGG
TAATATATTGAGTGATCTTGGCATCAAAAAAGAAGCGAAATTAGAAAAGCAGAAAAGCATTGACATCAATTTTATTCAAA
ATATTAACTCTAAATATAGAGAAGATTGTAAAAGGAAAATCAGTCTATCAAAATCACAATTCAGACAAGATTTATTTGCC
CTGACTGAGTTGGGTTTTAAAAAAAATGGTTTTTTTGTAGAATTTGGTTCTTATGATGGCCTGACTGGTTCTAATTCTTA
TCTATTAGAGAAATTTTTTAATTGGGATGGGATATTAGCTGAACCAATGATTTCCTGTCATGAAAAGTTAAAAAATAATC
GTTCAGTACGTATAGAAACCAAATGTGTATGGAAATCATCTGGTCAAGAGATCTTATTTAACGAACCTTTTTCATATAAG
CAAATGGCTACAATAGATAGTTTTTCGGAGGAGAAACCAGATTATTATAAGGAAGGAAAAAGATATATTGTTAAATCAAT
TTCATTATTAGATTTATTAGATATAAATAATGCACCAAAGTTTATAGATTATTTATCTATAGATACAGAAGGAAGTGAAT
ATGATATTTTAAATGCTTTTGATTTTGAGAAATATAAATTTAGGGTAATTACCTGTGAGCATAATTTTACTCCTATGAGA
GAAAAAATTTATAACCTTTTAATTAATAACGGCTATAAAAGAAAATTAACAAATTTATCAAGAGTTGATGATTGGTATAT
TTATGAATCCTAA

Upstream 100 bases:

>100_bases
ACTAGCGTTATTAGTGAAGTATAAATAATCTTAGGAAGAGGTTCAAATGGAACTTATAGTTAGTAGTAGAATTAGTTCAT
ACAAAAGTTTTTAGAAGACA

Downstream 100 bases:

>100_bases
ATTAATTTACAATAAAATCAAAACTTAATAATTTTACCAAAAAGATAAAACAAGAATTCAAATTAGTAGTACAATCATTT
AAATCAAAGTAAAAAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family; TPR Domain Protein; TPR Repeat Protein; O-GlcNAc Transferase; Methyltransferase Type; Methyltransferase FkbM Family; Flp Pilus Assembly Protein TadD; TPR Repeat; O-Linked N-Acetylglucosamine Transferase; Glycosyl Transferase Family Protein; FkbM Family Methyltransferase; FlbA Protein; Transcriptional Regulator MerR Family; Tetratricopeptide Tpr_2 Repeat Protein; Sel1 Repeat Family; TPR Domain Containing Protein; SEC-C Motif Domain-Containing Protein; Porphyrin Biosynthesis Protein; Polypeptide N-Acetylglucosaminyltransferase; Sulfotransferase; Methyltransferase Fkbm Family; Peptidase S1 And S6 Chymotrypsin/Hap; TPR Domain/SEC-C Motif Domain Protein; Methyltransferase Protein; Tetratricopeptide Repeat Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Protein Kinase; TPR Repeat-Containing SPINDLY Family Protein

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MESSDEDQGEKNKPQVQIFTVPFTLGEIKENINININTPSKPSKEQIINQAFKFHSQGNISEAAKYYQYCINQAFKDYRV
FTNYGVILKKFGKLQEAEKFQREAIQINPNFAEAYSNLGNILRDLGQLKEAELSFRKAIEIKSDYAEAYSNLGNILRDLG
QLKEAELSFRKAIEIKPDYAEAHSNLGNILSDLGIKKEAKLEKQKSIDINFIQNINSKYREDCKRKISLSKSQFRQDLFA
LTELGFKKNGFFVEFGSYDGLTGSNSYLLEKFFNWDGILAEPMISCHEKLKNNRSVRIETKCVWKSSGQEILFNEPFSYK
QMATIDSFSEEKPDYYKEGKRYIVKSISLLDLLDINNAPKFIDYLSIDTEGSEYDILNAFDFEKYKFRVITCEHNFTPMR
EKIYNLLINNGYKRKLTNLSRVDDWYIYES

Sequences:

>Translated_430_residues
MESSDEDQGEKNKPQVQIFTVPFTLGEIKENINININTPSKPSKEQIINQAFKFHSQGNISEAAKYYQYCINQAFKDYRV
FTNYGVILKKFGKLQEAEKFQREAIQINPNFAEAYSNLGNILRDLGQLKEAELSFRKAIEIKSDYAEAYSNLGNILRDLG
QLKEAELSFRKAIEIKPDYAEAHSNLGNILSDLGIKKEAKLEKQKSIDINFIQNINSKYREDCKRKISLSKSQFRQDLFA
LTELGFKKNGFFVEFGSYDGLTGSNSYLLEKFFNWDGILAEPMISCHEKLKNNRSVRIETKCVWKSSGQEILFNEPFSYK
QMATIDSFSEEKPDYYKEGKRYIVKSISLLDLLDINNAPKFIDYLSIDTEGSEYDILNAFDFEKYKFRVITCEHNFTPMR
EKIYNLLINNGYKRKLTNLSRVDDWYIYES
>Mature_430_residues
MESSDEDQGEKNKPQVQIFTVPFTLGEIKENINININTPSKPSKEQIINQAFKFHSQGNISEAAKYYQYCINQAFKDYRV
FTNYGVILKKFGKLQEAEKFQREAIQINPNFAEAYSNLGNILRDLGQLKEAELSFRKAIEIKSDYAEAYSNLGNILRDLG
QLKEAELSFRKAIEIKPDYAEAHSNLGNILSDLGIKKEAKLEKQKSIDINFIQNINSKYREDCKRKISLSKSQFRQDLFA
LTELGFKKNGFFVEFGSYDGLTGSNSYLLEKFFNWDGILAEPMISCHEKLKNNRSVRIETKCVWKSSGQEILFNEPFSYK
QMATIDSFSEEKPDYYKEGKRYIVKSISLLDLLDINNAPKFIDYLSIDTEGSEYDILNAFDFEKYKFRVITCEHNFTPMR
EKIYNLLINNGYKRKLTNLSRVDDWYIYES

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=135, Percent_Identity=40, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI32307150, Length=135, Percent_Identity=40, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI118766330, Length=153, Percent_Identity=32.6797385620915, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI118766328, Length=153, Percent_Identity=32.6797385620915, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI301336134, Length=136, Percent_Identity=31.6176470588235, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI83415184, Length=136, Percent_Identity=31.6176470588235, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI22749211, Length=109, Percent_Identity=35.7798165137615, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=151, Percent_Identity=35.7615894039735, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI115532690, Length=151, Percent_Identity=35.7615894039735, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25147174, Length=109, Percent_Identity=33.9449541284404, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17647755, Length=186, Percent_Identity=33.8709677419355, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24585827, Length=186, Percent_Identity=33.8709677419355, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24585829, Length=186, Percent_Identity=33.8709677419355, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24647123, Length=144, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24656717, Length=127, Percent_Identity=29.9212598425197, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI18110006, Length=127, Percent_Identity=29.9212598425197, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50012; Mature: 50012

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSDEDQGEKNKPQVQIFTVPFTLGEIKENINININTPSKPSKEQIINQAFKFHSQGNI
CCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCH
SEAAKYYQYCINQAFKDYRVFTNYGVILKKFGKLQEAEKFQREAIQINPNFAEAYSNLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHH
ILRDLGQLKEAELSFRKAIEIKSDYAEAYSNLGNILRDLGQLKEAELSFRKAIEIKPDYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHH
EAHSNLGNILSDLGIKKEAKLEKQKSIDINFIQNINSKYREDCKRKISLSKSQFRQDLFA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LTELGFKKNGFFVEFGSYDGLTGSNSYLLEKFFNWDGILAEPMISCHEKLKNNRSVRIET
HHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEE
KCVWKSSGQEILFNEPFSYKQMATIDSFSEEKPDYYKEGKRYIVKSISLLDLLDINNAPK
EEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
FIDYLSIDTEGSEYDILNAFDFEKYKFRVITCEHNFTPMREKIYNLLINNGYKRKLTNLS
CEEEEEECCCCCCCCEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHH
RVDDWYIYES
HCCCEEEECC
>Mature Secondary Structure
MESSDEDQGEKNKPQVQIFTVPFTLGEIKENINININTPSKPSKEQIINQAFKFHSQGNI
CCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCH
SEAAKYYQYCINQAFKDYRVFTNYGVILKKFGKLQEAEKFQREAIQINPNFAEAYSNLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHH
ILRDLGQLKEAELSFRKAIEIKSDYAEAYSNLGNILRDLGQLKEAELSFRKAIEIKPDYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHH
EAHSNLGNILSDLGIKKEAKLEKQKSIDINFIQNINSKYREDCKRKISLSKSQFRQDLFA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LTELGFKKNGFFVEFGSYDGLTGSNSYLLEKFFNWDGILAEPMISCHEKLKNNRSVRIET
HHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEE
KCVWKSSGQEILFNEPFSYKQMATIDSFSEEKPDYYKEGKRYIVKSISLLDLLDINNAPK
EEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
FIDYLSIDTEGSEYDILNAFDFEKYKFRVITCEHNFTPMREKIYNLLINNGYKRKLTNLS
CEEEEEECCCCCCCCEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHH
RVDDWYIYES
HCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA