| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026478
Identifier: 124026478
GI number: 124026478
Start: 1454624
End: 1455370
Strand: Reverse
Name: 124026478
Synonym: NATL1_17731
Alternate gene names: NA
Gene position: 1455370-1454624 (Counterclockwise)
Preceding gene: 124026480
Following gene: 124026475
Centisome position: 78.05
GC content: 33.87
Gene sequence:
>747_bases ATGAACGATTTAGATCTAAGTATTTCCTGTTTCCTTAAAGATGGCTTTAATTTGAAAAAGCATCTTATTGATTTCCTAAA TATTAGTAATGAACAATTAGATCAAAGATTACTTAACGGCGTTGATGATTTGGCAGCTCTTCACCCAGGAGCATTTACTG AGAACAATGCAGGCGAATTTTACGAGGAAAAAGTAGGCGATGCTCATTTAATAGATCTAGCGTCTTGGCATCTAAATAGT TCTAGTTACATAGCTGACACTCTTCGCTTACAACAAAAATTTGCTTCTGGAAAAGTTTTAGATTTTGGTGGTGGTATTGG TACACATGCCTTGGCAGCCTCGTTTTTACCAGAGGTTGAACATGTATGGTTTGTTGATCTTAACCCTCAAAACCGAAGCT TTGTAGAGCATAGGTCTAAGGAATTGGGTATCGAAGATAAGATTTCAATTTTTAGAGACTTAGAAAGCACATCTGATGTT GTTTTTGATTCTTTAGTTTGCTTGGATGTCCTTGAGCATCTTCCAAATCCTGCAAAACAATTAAAAATATTTTTGGAAAA ACTTTCTCCTGAAGGAATAGCTCTAATGAATTGGTATTTTTACAAAGGAAAAAACGGAGAGTATCCTTTTCATTTCGATG ATCCTACTCTGATTGAGAATTTCTTTTCTACATTACAGTTAAATTATTTAGAAGTTTTCCATCCTTTTTTGATTACTACG CGAGCTTATAAACCATTAAAAAAATAA
Upstream 100 bases:
>100_bases TCCAAAATTGATATTGCAGGTTGAGCTCACATGAAAATATTGTTCAAGTAACCCTGAACATTTAAAGTTATAACTCAGTG TGTTCAGTCAGCCAAATAAT
Downstream 100 bases:
>100_bases ACTAGACAGCCTTAGCAGTGGAAATATTAATTCTTTTTCTATTTCTTAGGCCTCTACGAATACTTTCAAAATGAACTGAT CCATCAGTTAGAGCGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNDLDLSISCFLKDGFNLKKHLIDFLNISNEQLDQRLLNGVDDLAALHPGAFTENNAGEFYEEKVGDAHLIDLASWHLNS SSYIADTLRLQQKFASGKVLDFGGGIGTHALAASFLPEVEHVWFVDLNPQNRSFVEHRSKELGIEDKISIFRDLESTSDV VFDSLVCLDVLEHLPNPAKQLKIFLEKLSPEGIALMNWYFYKGKNGEYPFHFDDPTLIENFFSTLQLNYLEVFHPFLITT RAYKPLKK
Sequences:
>Translated_248_residues MNDLDLSISCFLKDGFNLKKHLIDFLNISNEQLDQRLLNGVDDLAALHPGAFTENNAGEFYEEKVGDAHLIDLASWHLNS SSYIADTLRLQQKFASGKVLDFGGGIGTHALAASFLPEVEHVWFVDLNPQNRSFVEHRSKELGIEDKISIFRDLESTSDV VFDSLVCLDVLEHLPNPAKQLKIFLEKLSPEGIALMNWYFYKGKNGEYPFHFDDPTLIENFFSTLQLNYLEVFHPFLITT RAYKPLKK >Mature_248_residues MNDLDLSISCFLKDGFNLKKHLIDFLNISNEQLDQRLLNGVDDLAALHPGAFTENNAGEFYEEKVGDAHLIDLASWHLNS SSYIADTLRLQQKFASGKVLDFGGGIGTHALAASFLPEVEHVWFVDLNPQNRSFVEHRSKELGIEDKISIFRDLESTSDV VFDSLVCLDVLEHLPNPAKQLKIFLEKLSPEGIALMNWYFYKGKNGEYPFHFDDPTLIENFFSTLQLNYLEVFHPFLITT RAYKPLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28269; Mature: 28269
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLDLSISCFLKDGFNLKKHLIDFLNISNEQLDQRLLNGVDDLAALHPGAFTENNAGEF CCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHH YEEKVGDAHLIDLASWHLNSSSYIADTLRLQQKFASGKVLDFGGGIGTHALAASFLPEVE HHHHCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCC HVWFVDLNPQNRSFVEHRSKELGIEDKISIFRDLESTSDVVFDSLVCLDVLEHLPNPAKQ EEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKIFLEKLSPEGIALMNWYFYKGKNGEYPFHFDDPTLIENFFSTLQLNYLEVFHPFLITT HHHHHHHHCCCCEEEEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RAYKPLKK HHHCCCCC >Mature Secondary Structure MNDLDLSISCFLKDGFNLKKHLIDFLNISNEQLDQRLLNGVDDLAALHPGAFTENNAGEF CCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHH YEEKVGDAHLIDLASWHLNSSSYIADTLRLQQKFASGKVLDFGGGIGTHALAASFLPEVE HHHHCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCC HVWFVDLNPQNRSFVEHRSKELGIEDKISIFRDLESTSDVVFDSLVCLDVLEHLPNPAKQ EEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKIFLEKLSPEGIALMNWYFYKGKNGEYPFHFDDPTLIENFFSTLQLNYLEVFHPFLITT HHHHHHHHCCCCEEEEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RAYKPLKK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA