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The map label for this gene is spoIID [H]

Identifier: 124026480

GI number: 124026480

Start: 1456460

End: 1457677

Strand: Reverse

Name: spoIID [H]

Synonym: NATL1_17751

Alternate gene names: 124026480

Gene position: 1457677-1456460 (Counterclockwise)

Preceding gene: 124026483

Following gene: 124026478

Centisome position: 78.17

GC content: 31.28

Gene sequence:

>1218_bases
GTGAGCGCATCACCTAAAAGAAAATCTGGATTGGCAATAATCTTTATAGCTATATTTTTTATCTCTCCATTAAAGGCAAT
TGCAGCAAAAGAACCAACAATGCGTGTACTGATATCTAAAGATAATAAGGCAAGATTTAGAGCAGATGGTGTGAAAAATA
TTTTTGTTGAAGGTATTCCTTCTAATCATAGAAGAATTAAATCTTTAAATTTAGTTTATAAGAATAATAAGGTTAAATAT
TCAATTGATAACAACCTGAATACATGGTTCGATTTACCAAATGATTTCAGTTTGATTATAAGAAATAATGATAAAAGAGG
GATTTGGTTTAAGAATAGAAGATATGCCGGAGAATTAAAAGTTTCATTGAATGAAAAGAAATTAAATATAATAAATTATT
TAAAATTAGAGAAGTATTTAAAAAGTGTAGTTGGTAGTGAAATGCCTAAAGAATTTCCCCTTGCAGCACTTCAAGCACAA
GCAATAGCAGCCAGGACTTATGCTTTAAAACTTTTAAATAAAAACAAATCATTTGATCTTCGTTCAACACAAGCTAGTCA
AGTCTACTTAGGACTTGAGTCTGAAACAGCAAAAATCAATAGAGCAGTTAAAAGTACAGATTCACTTGCTCTATTTCATA
AAGATAAGCTGATAAATGCAGTTTTTCATAGTAGTTCTGGTGGTAGGACTGAGAATAGTGGAATGGTTTGGAAGTATCAA
TTACCTTATTTAAAAAGTGTTGTTGACTTTGATCACAATGGCACAAAGTATAGATGGACTAATAAATTTACCTCAGGAGA
ATTAGATCAGATCTTCCCTGGTTTGGGCGGGTTGAATAGTATACAAATTATTCAAAAAAGTGATACCGATAGAGTCTTAA
AAATTAGACTCTATGGAACAAATGGAAATAAAAATATCTCCGGTAAAAGCTTAAGAGAAAAATTGCAATTGCTTAGTACT
AAATTTGATCTTTATTTGGAATTTAACCAAATAAATCTAGATAATAAATTGAATTCTGATATAAAAATAGCTGAAGATTT
TTCACTTCAATCTCTCCCGCCAATCCCATCAGATTATTTTTTATTGGTTCAAGGTTATGGCGCTGGTCATGGCGTGGGAA
TGAGCCAATGGGGTGCTAAAGCAATGGCTGAAAAGGGGTCTGGCTTTCGTAAAATTCTAAAACATTATTATACAGGTGTA
CAAATAAAAGCCTATTAG

Upstream 100 bases:

>100_bases
CAAGTTTCCCCCTTTTAAGACATGGTGACATTCATAGCTTTGACCACTGGTGGATCTTCTTTCTTATAGGCAAAATTAGT
ACCTAAATCCAATTTTTATT

Downstream 100 bases:

>100_bases
GAATATATTTAGTAGCTATAGATTATTGTAAGATTTACATTTTACGAGTCTAACCAATTGCATTGAAAACAACCTTAGGC
TTAATTGCAAAACTTTCATC

Product: sporulation protein SpoIID

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSASPKRKSGLAIIFIAIFFISPLKAIAAKEPTMRVLISKDNKARFRADGVKNIFVEGIPSNHRRIKSLNLVYKNNKVKY
SIDNNLNTWFDLPNDFSLIIRNNDKRGIWFKNRRYAGELKVSLNEKKLNIINYLKLEKYLKSVVGSEMPKEFPLAALQAQ
AIAARTYALKLLNKNKSFDLRSTQASQVYLGLESETAKINRAVKSTDSLALFHKDKLINAVFHSSSGGRTENSGMVWKYQ
LPYLKSVVDFDHNGTKYRWTNKFTSGELDQIFPGLGGLNSIQIIQKSDTDRVLKIRLYGTNGNKNISGKSLREKLQLLST
KFDLYLEFNQINLDNKLNSDIKIAEDFSLQSLPPIPSDYFLLVQGYGAGHGVGMSQWGAKAMAEKGSGFRKILKHYYTGV
QIKAY

Sequences:

>Translated_405_residues
MSASPKRKSGLAIIFIAIFFISPLKAIAAKEPTMRVLISKDNKARFRADGVKNIFVEGIPSNHRRIKSLNLVYKNNKVKY
SIDNNLNTWFDLPNDFSLIIRNNDKRGIWFKNRRYAGELKVSLNEKKLNIINYLKLEKYLKSVVGSEMPKEFPLAALQAQ
AIAARTYALKLLNKNKSFDLRSTQASQVYLGLESETAKINRAVKSTDSLALFHKDKLINAVFHSSSGGRTENSGMVWKYQ
LPYLKSVVDFDHNGTKYRWTNKFTSGELDQIFPGLGGLNSIQIIQKSDTDRVLKIRLYGTNGNKNISGKSLREKLQLLST
KFDLYLEFNQINLDNKLNSDIKIAEDFSLQSLPPIPSDYFLLVQGYGAGHGVGMSQWGAKAMAEKGSGFRKILKHYYTGV
QIKAY
>Mature_404_residues
SASPKRKSGLAIIFIAIFFISPLKAIAAKEPTMRVLISKDNKARFRADGVKNIFVEGIPSNHRRIKSLNLVYKNNKVKYS
IDNNLNTWFDLPNDFSLIIRNNDKRGIWFKNRRYAGELKVSLNEKKLNIINYLKLEKYLKSVVGSEMPKEFPLAALQAQA
IAARTYALKLLNKNKSFDLRSTQASQVYLGLESETAKINRAVKSTDSLALFHKDKLINAVFHSSSGGRTENSGMVWKYQL
PYLKSVVDFDHNGTKYRWTNKFTSGELDQIFPGLGGLNSIQIIQKSDTDRVLKIRLYGTNGNKNISGKSLREKLQLLSTK
FDLYLEFNQINLDNKLNSDIKIAEDFSLQSLPPIPSDYFLLVQGYGAGHGVGMSQWGAKAMAEKGSGFRKILKHYYTGVQ
IKAY

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 45811; Mature: 45680

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASPKRKSGLAIIFIAIFFISPLKAIAAKEPTMRVLISKDNKARFRADGVKNIFVEGIP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCEEEEECCC
SNHRRIKSLNLVYKNNKVKYSIDNNLNTWFDLPNDFSLIIRNNDKRGIWFKNRRYAGELK
CCCCEEEEEEEEEECCEEEEEECCCCCEEEECCCCEEEEEEECCCCCEEEECCEECEEEE
VSLNEKKLNIINYLKLEKYLKSVVGSEMPKEFPLAALQAQAIAARTYALKLLNKNKSFDL
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCEE
RSTQASQVYLGLESETAKINRAVKSTDSLALFHKDKLINAVFHSSSGGRTENSGMVWKYQ
ECCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEE
LPYLKSVVDFDHNGTKYRWTNKFTSGELDQIFPGLGGLNSIQIIQKSDTDRVLKIRLYGT
CHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEC
NGNKNISGKSLREKLQLLSTKFDLYLEFNQINLDNKLNSDIKIAEDFSLQSLPPIPSDYF
CCCCCCCHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEE
LLVQGYGAGHGVGMSQWGAKAMAEKGSGFRKILKHYYTGVQIKAY
EEEEECCCCCCCCHHHHCHHHHHHCCCCHHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
SASPKRKSGLAIIFIAIFFISPLKAIAAKEPTMRVLISKDNKARFRADGVKNIFVEGIP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCEEEEECCC
SNHRRIKSLNLVYKNNKVKYSIDNNLNTWFDLPNDFSLIIRNNDKRGIWFKNRRYAGELK
CCCCEEEEEEEEEECCEEEEEECCCCCEEEECCCCEEEEEEECCCCCEEEECCEECEEEE
VSLNEKKLNIINYLKLEKYLKSVVGSEMPKEFPLAALQAQAIAARTYALKLLNKNKSFDL
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCEE
RSTQASQVYLGLESETAKINRAVKSTDSLALFHKDKLINAVFHSSSGGRTENSGMVWKYQ
ECCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEE
LPYLKSVVDFDHNGTKYRWTNKFTSGELDQIFPGLGGLNSIQIIQKSDTDRVLKIRLYGT
CHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEC
NGNKNISGKSLREKLQLLSTKFDLYLEFNQINLDNKLNSDIKIAEDFSLQSLPPIPSDYF
CCCCCCCHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEE
LLVQGYGAGHGVGMSQWGAKAMAEKGSGFRKILKHYYTGVQIKAY
EEEEECCCCCCCCHHHHCHHHHHHCCCCHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3114424 [H]