| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is msrA2 [H]
Identifier: 124026465
GI number: 124026465
Start: 1441129
End: 1441740
Strand: Reverse
Name: msrA2 [H]
Synonym: NATL1_17601
Alternate gene names: 124026465
Gene position: 1441740-1441129 (Counterclockwise)
Preceding gene: 124026466
Following gene: 124026462
Centisome position: 77.32
GC content: 32.68
Gene sequence:
>612_bases ATGATTGCTATGAATAAAATCTTCAGAAGACTAATAGTATTTTCTATACTTCTGCAATTATTAATAGCTTGTCCTTTGAA AGCATTTGCCGAATCAGAAGAAGCTATTTTTGCAGGTGGTTGCTTTTGGTGCCTAGAACATGATCTAGAAAAACTTGATG GAGTCGTCTCTGCAGAAAGTGGATACTCTGGAGGAGATTTGATTAATCCCACGTATCAAGATCATAGTGGGCATCAAGAA GTTGTGAAAGTTATTTTTGATTCTGACATTATTAGCTATAAAGATTTACTTAAGCAATATTGGGTTAATATTGATCCTTT TGATAATAATGGACAATTTTGTGATAGAGGTGATTCATATAAGCCAGTTATTTTTACATCTAATCAAGAACAAAAGCGAG ATGCAAAAGAGAGTCAAGAAACTATCTCTGTTGGATTGAATATACCCTTGGAGCAATTAAAGGTTGATATTGTTGAGTCA AAAGTCTTTTGGTTGGCAGAGAACTATCATCAAGATTTTGCAGTTAAAAATCCACTCAAATACAATTTTTATAGGACCAG TTGTGGTAGAGATAATAGATTAAAAAAAGTCTGGGGAGAATATAAGTATTAA
Upstream 100 bases:
>100_bases AAGAGGACATAAAGCTTGGTTATGAAAGATTGAAAGATAAATTAGGAAAACCTGGAGTTACAGATAGAGCATCAAGGGAT ATTCTAGACTTATTAATTTA
Downstream 100 bases:
>100_bases CAAAATAATTAATCTATAGATCTTAAATATATATAGTTTAGATCTATAGATTATGCGTGAATAAATTAATTGGTGTTTAG ACTCAACTCCTTGATCCAAT
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIAMNKIFRRLIVFSILLQLLIACPLKAFAESEEAIFAGGCFWCLEHDLEKLDGVVSAESGYSGGDLINPTYQDHSGHQE VVKVIFDSDIISYKDLLKQYWVNIDPFDNNGQFCDRGDSYKPVIFTSNQEQKRDAKESQETISVGLNIPLEQLKVDIVES KVFWLAENYHQDFAVKNPLKYNFYRTSCGRDNRLKKVWGEYKY
Sequences:
>Translated_203_residues MIAMNKIFRRLIVFSILLQLLIACPLKAFAESEEAIFAGGCFWCLEHDLEKLDGVVSAESGYSGGDLINPTYQDHSGHQE VVKVIFDSDIISYKDLLKQYWVNIDPFDNNGQFCDRGDSYKPVIFTSNQEQKRDAKESQETISVGLNIPLEQLKVDIVES KVFWLAENYHQDFAVKNPLKYNFYRTSCGRDNRLKKVWGEYKY >Mature_203_residues MIAMNKIFRRLIVFSILLQLLIACPLKAFAESEEAIFAGGCFWCLEHDLEKLDGVVSAESGYSGGDLINPTYQDHSGHQE VVKVIFDSDIISYKDLLKQYWVNIDPFDNNGQFCDRGDSYKPVIFTSNQEQKRDAKESQETISVGLNIPLEQLKVDIVES KVFWLAENYHQDFAVKNPLKYNFYRTSCGRDNRLKKVWGEYKY
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=162, Percent_Identity=35.1851851851852, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI208609995, Length=162, Percent_Identity=35.1851851851852, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI208609993, Length=109, Percent_Identity=33.9449541284404, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=36.1842105263158, Blast_Score=102, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17533973, Length=141, Percent_Identity=32.6241134751773, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24664627, Length=142, Percent_Identity=30.2816901408451, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 23426; Mature: 23426
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMNKIFRRLIVFSILLQLLIACPLKAFAESEEAIFAGGCFWCLEHDLEKLDGVVSAES CCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEECCC GYSGGDLINPTYQDHSGHQEVVKVIFDSDIISYKDLLKQYWVNIDPFDNNGQFCDRGDSY CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KPVIFTSNQEQKRDAKESQETISVGLNIPLEQLKVDIVESKVFWLAENYHQDFAVKNPLK CCEEEECCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YNFYRTSCGRDNRLKKVWGEYKY EEEEECCCCCCCHHHHHHCCCCC >Mature Secondary Structure MIAMNKIFRRLIVFSILLQLLIACPLKAFAESEEAIFAGGCFWCLEHDLEKLDGVVSAES CCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEECCC GYSGGDLINPTYQDHSGHQEVVKVIFDSDIISYKDLLKQYWVNIDPFDNNGQFCDRGDSY CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KPVIFTSNQEQKRDAKESQETISVGLNIPLEQLKVDIVESKVFWLAENYHQDFAVKNPLK CCEEEECCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YNFYRTSCGRDNRLKKVWGEYKY EEEEECCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]