Click here to switch to the map view.

The map label for this gene is wcaJ [H]

Identifier: 124026443

GI number: 124026443

Start: 1423554

End: 1424306

Strand: Reverse

Name: wcaJ [H]

Synonym: NATL1_17381

Alternate gene names: 124026443

Gene position: 1424306-1423554 (Counterclockwise)

Preceding gene: 124026444

Following gene: 124026436

Centisome position: 76.38

GC content: 31.34

Gene sequence:

>753_bases
GTGCAAACTAATCCTAGAAAATCTTTATTACGATGGTCTGAGTTCCGTAAAGGTTCTCCAACAATTCCGTATGAAGTCAT
CTCAAAAGAGCCATCCTCTTTGCCTGCTGTAGAAATAATAAGAAATCAAAGTAGATCTGGACGCACATTAAAAAGGATAG
GAGATATTGTTTTTTCTTTGATTGTTTTAACCTTAGGCTCACCAATATTTATCTTAATTGCAATTTTAGTAAAGTTAAGT
TCTCCCGGATCAGTTTTTTATATACAAAAAAGAGTAGGTAGAAACTATAGAGAATTTGGATGTATAAAGTTTCGTACTAT
GTATAAAGATGCTGAAGATTTATTACCAAACTTATTAGAAAAATATCCTCTTATGAGAAAGGAATTTGAAAAAGATTTTA
AATTACGTCAAGATCCAAGAATAACAAAATTAGGAAGATTTCTTCGACGATCTAGTTTAGATGAATTACCCCAATTCTTT
AATGTTTTGAAAGGGGAAATGAGTGTTGTTGGACCAAGACCAATAGTTAGTAATGAGATTATTAAATACAGTCTTTTTAT
GGAAGAGGTTATATCAGTTAGACCAGGTCTAACTGGATTATGGCAGGTTAGTGGTAGAAATAATCTGAGTTACAAAAAAA
GGGTTGAATTAGACTTATTTTATGCAAGAAATAGGAATTTTCTACTTGATTTGGAAATCATTATTCTTACGTTAGGCGTT
TTAATCTTTCCAATGGATAGAGGTGCTTTTTGA

Upstream 100 bases:

>100_bases
TGTGACATTGCTACTAGTGACCTTACTTCTTCATCATAAAAATCCTAATTATGTATGGTGTAAATCTATTCGAGTAGTGA
GCTTACTAACTCAATAATTT

Downstream 100 bases:

>100_bases
ATTTATTAATTTATAAATTTTATTATCAAGTAAAAACCTATAAGCCAAACTAGCTCAAGCCTAAGACTCAGACCAAGTAT
TTTTCTGACTGAATTAATAC

Product: galactosyl-1-phosphate transferase

Products: NA

Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQTNPRKSLLRWSEFRKGSPTIPYEVISKEPSSLPAVEIIRNQSRSGRTLKRIGDIVFSLIVLTLGSPIFILIAILVKLS
SPGSVFYIQKRVGRNYREFGCIKFRTMYKDAEDLLPNLLEKYPLMRKEFEKDFKLRQDPRITKLGRFLRRSSLDELPQFF
NVLKGEMSVVGPRPIVSNEIIKYSLFMEEVISVRPGLTGLWQVSGRNNLSYKKRVELDLFYARNRNFLLDLEIIILTLGV
LIFPMDRGAF

Sequences:

>Translated_250_residues
MQTNPRKSLLRWSEFRKGSPTIPYEVISKEPSSLPAVEIIRNQSRSGRTLKRIGDIVFSLIVLTLGSPIFILIAILVKLS
SPGSVFYIQKRVGRNYREFGCIKFRTMYKDAEDLLPNLLEKYPLMRKEFEKDFKLRQDPRITKLGRFLRRSSLDELPQFF
NVLKGEMSVVGPRPIVSNEIIKYSLFMEEVISVRPGLTGLWQVSGRNNLSYKKRVELDLFYARNRNFLLDLEIIILTLGV
LIFPMDRGAF
>Mature_250_residues
MQTNPRKSLLRWSEFRKGSPTIPYEVISKEPSSLPAVEIIRNQSRSGRTLKRIGDIVFSLIVLTLGSPIFILIAILVKLS
SPGSVFYIQKRVGRNYREFGCIKFRTMYKDAEDLLPNLLEKYPLMRKEFEKDFKLRQDPRITKLGRFLRRSSLDELPQFF
NVLKGEMSVVGPRPIVSNEIIKYSLFMEEVISVRPGLTGLWQVSGRNNLSYKKRVELDLFYARNRNFLLDLEIIILTLGV
LIFPMDRGAF

Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=207, Percent_Identity=40.0966183574879, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: =2.7.8.6 [H]

Molecular weight: Translated: 28996; Mature: 28996

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNPRKSLLRWSEFRKGSPTIPYEVISKEPSSLPAVEIIRNQSRSGRTLKRIGDIVFSL
CCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
IVLTLGSPIFILIAILVKLSSPGSVFYIQKRVGRNYREFGCIKFRTMYKDAEDLLPNLLE
HHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
KYPLMRKEFEKDFKLRQDPRITKLGRFLRRSSLDELPQFFNVLKGEMSVVGPRPIVSNEI
HCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCHHHHH
IKYSLFMEEVISVRPGLTGLWQVSGRNNLSYKKRVELDLFYARNRNFLLDLEIIILTLGV
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHEEEEEEEECCCCEEEHHHHHHHHHHH
LIFPMDRGAF
HHCCCCCCCC
>Mature Secondary Structure
MQTNPRKSLLRWSEFRKGSPTIPYEVISKEPSSLPAVEIIRNQSRSGRTLKRIGDIVFSL
CCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
IVLTLGSPIFILIAILVKLSSPGSVFYIQKRVGRNYREFGCIKFRTMYKDAEDLLPNLLE
HHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
KYPLMRKEFEKDFKLRQDPRITKLGRFLRRSSLDELPQFFNVLKGEMSVVGPRPIVSNEI
HCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCHHHHH
IKYSLFMEEVISVRPGLTGLWQVSGRNNLSYKKRVELDLFYARNRNFLLDLEIIILTLGV
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHEEEEEEEECCCCEEEHHHHHHHHHHH
LIFPMDRGAF
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]