| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026444
Identifier: 124026444
GI number: 124026444
Start: 1424368
End: 1425591
Strand: Reverse
Name: 124026444
Synonym: NATL1_17391
Alternate gene names: NA
Gene position: 1425591-1424368 (Counterclockwise)
Preceding gene: 124026445
Following gene: 124026443
Centisome position: 76.45
GC content: 36.6
Gene sequence:
>1224_bases TTGAGCGTAAATTCATCTTTAGATCTTCCAAGCAATATTGCATTAGTACATGAGTGGTTTACTCCAAGATCGACAGGAGG TGCTGAGAATGTTGTTCAGGTGATTGATGATTTGTTATCTGAAATTGCATCGCAGCCAGAACTGTTTTCTTTGGTTAATG AAGAGAGGTTAGAAAAAAATAGCTGGTTATTTGATCGAAAAGTACATACTAGCTTTATTCAAAATTTACCATTCGGGATC TCACATGTTCAACAATATTTACCCCTTTTGCCTTTTGCAATTGAGCAACTCGATTTTGAGGGATATCCATTGATTTTAAG CAGTAATCATCTTGTCGCTAAGGGAATTTTGACATCGCCTGATCAACTTCATATTAGTTATGTCCATACACCTGTTAGAT ACGCTTGGGATCAAATGAATATATATTTGAAAAGATCTTTTTTAAGAAAAATTGGTTTAGGGCCGATAATTAGATGGCAA TTGCATACTTTGAGGCAATGGGATCAATTAAGTAGCTCAAGAGTAGATTATCTGTTGGCCAATTCTAATTTTACGGCAAA AAGGATTTGGAAGTATTGGAGAAGGCGTTCAGAGGTTCTGCATCCACCTGTTGATGTAAATCGTTTTGAATGGAATAGGC CTAGGGAAGATTTCTATTTAAGTGTCTGTAGATTGGTTCCTAATAAAAGGGTTGATTTACTTGTTAGGGCTTTTAATAGG CTTAAATTGCCTTTAATAGTTGTTGGCGACGGAGTGGAAAAGGAATATTTAAAAAAACTTGCAGGTCCAACTGTTCAAAT TATTGGTTTTCAAAGCAAAGAGAAGATTGAAAGTCTAATGAGCAGATGTAGAGCCTTTGTCTATGCTGGTATTGAGGATT TTGGAATAGCTCCTGTGGAGGCAATGGCCTCAGGTGCTCCTGTGATTGCTTTTGGTAAGGGAGGGGTTTTAGATACAGTT AAATGTTTTCATTCTGATTCTGATAAAGGAGCAACTGGCCTTTTGTTCCCTTCTCAGACAGTAAAGTCCCTGGTTGAAGC AATCGAATTTTTCAAGCAAAAGCAACTTTGGAGAGATTTAAAACCTGAGTTCATTAGAGATTGGAGCAATTCTTTTTCTC AAGATTCTTTTAAAGATAAATTTGCCAAAACCATAAATAGAGCTTGGAGGGAGCATGTCAATTCTTGTGACATTGCTACT AGTGACCTTACTTCTTCATCATAA
Upstream 100 bases:
>100_bases AAATAATTTAAGTTTCAACAATTGATGATTTCATTCTATCTTGTCATAATATCTAAATTGCAATAAAATAAAAATAATTT AAGGATTTAAGGATATTACT
Downstream 100 bases:
>100_bases AAATCCTAATTATGTATGGTGTAAATCTATTCGAGTAGTGAGCTTACTAACTCAATAATTTGTGCAAACTAATCCTAGAA AATCTTTATTACGATGGTCT
Product: glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; Lipopolysaccharide Biosynthesis Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Hexosyltransferase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKNSWLFDRKVHTSFIQNLPFGI SHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSPDQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQ LHTLRQWDQLSSSRVDYLLANSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVEAMASGAPVIAFGKGGVLDTV KCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDLKPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIAT SDLTSSS
Sequences:
>Translated_407_residues MSVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKNSWLFDRKVHTSFIQNLPFGI SHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSPDQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQ LHTLRQWDQLSSSRVDYLLANSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVEAMASGAPVIAFGKGGVLDTV KCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDLKPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIAT SDLTSSS >Mature_406_residues SVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKNSWLFDRKVHTSFIQNLPFGIS HVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSPDQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQL HTLRQWDQLSSSRVDYLLANSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNRL KLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVEAMASGAPVIAFGKGGVLDTVK CFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDLKPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIATS DLTSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI32564184, Length=259, Percent_Identity=26.6409266409266, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46678; Mature: 46547
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKN CCCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC SWLFDRKVHTSFIQNLPFGISHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSP CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC DQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQLHTLRQWDQLSSSRVDYLLA CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE NSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVE CCCCEEEECCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCHH AMASGAPVIAFGKGGVLDTVKCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDL HHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHC KPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIATSDLTSSS CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SVNSSLDLPSNIALVHEWFTPRSTGGAENVVQVIDDLLSEIASQPELFSLVNEERLEKN CCCCCCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC SWLFDRKVHTSFIQNLPFGISHVQQYLPLLPFAIEQLDFEGYPLILSSNHLVAKGILTSP CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC DQLHISYVHTPVRYAWDQMNIYLKRSFLRKIGLGPIIRWQLHTLRQWDQLSSSRVDYLLA CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE NSNFTAKRIWKYWRRRSEVLHPPVDVNRFEWNRPREDFYLSVCRLVPNKRVDLLVRAFNR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH LKLPLIVVGDGVEKEYLKKLAGPTVQIIGFQSKEKIESLMSRCRAFVYAGIEDFGIAPVE CCCCEEEECCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCCCHH AMASGAPVIAFGKGGVLDTVKCFHSDSDKGATGLLFPSQTVKSLVEAIEFFKQKQLWRDL HHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHC KPEFIRDWSNSFSQDSFKDKFAKTINRAWREHVNSCDIATSDLTSSS CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA