| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026378
Identifier: 124026378
GI number: 124026378
Start: 1364415
End: 1364996
Strand: Direct
Name: 124026378
Synonym: NATL1_16721
Alternate gene names: NA
Gene position: 1364415-1364996 (Clockwise)
Preceding gene: 124026377
Following gene: 124026379
Centisome position: 73.17
GC content: 31.44
Gene sequence:
>582_bases ATGTGGAGAGGTTATTTCAAAAAAGCAACTAATATGACTTTTATAGATATCGATGAAAGTTGTCTAAGATTTGAAGAAAG TGAAATAAATATTTTAATTGGTGATCAATCAGACAAATCTTTTCTCAATAAAGTTATTGAAAATCACGGACCTTTTGATG TGATCATAGATGACGGTAGTCATCTATGTAATGATCAAATCACTTCATTTAAATCCCTTTGGCCTGCAATCAAAGATAAT GGAATTTACTTAGTAGAAGACACACATACAAGTTATTGGCCAGGATTTGGAGGAGGATATAGGAATGAAGCTAGCTTTAT TGAATTCTCAAAAAGAATAGTGGATAGAATGCATACTTGGTGGACTGATCAAGATGAATTATTTCCTTATAATCAGCAAC CTATAAATATAAACAGTGTGAGATTTTATGACTCAATTATTGCATTTACGAAGAAAGAAAATAGAACACACCCATTTAAT ATTACTTCTGTTAATGGAAAAATCTCAAAAGACAGGCGGGCATTTGGACTTAGAGAACGGGAGTCACTTTTTGACAAAGA TTCTAAATTTCATCAAAACTAA
Upstream 100 bases:
>100_bases GTCACAATATTTTGAAACTTATGACAAAGAGTTATCTTATCTGAGAGATAAACCTATCTCCTTCCTAGAGATAGGAGTCT ACCAAGGTGGTTCAATACCT
Downstream 100 bases:
>100_bases AATTATTTATACATAGAATATAAAACTAGATTCAATCAAAATTATGTATATATAAAAAAATCATGAAGCTTATAATAAAT CTCAAAATTAATGATCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGSHLCNDQITSFKSLWPAIKDN GIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTWWTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFN ITSVNGKISKDRRAFGLRERESLFDKDSKFHQN
Sequences:
>Translated_193_residues MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGSHLCNDQITSFKSLWPAIKDN GIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTWWTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFN ITSVNGKISKDRRAFGLRERESLFDKDSKFHQN >Mature_193_residues MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGSHLCNDQITSFKSLWPAIKDN GIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTWWTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFN ITSVNGKISKDRRAFGLRERESLFDKDSKFHQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22696; Mature: 22696
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGS CCCCHHHHCCCCEEEECCHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC HLCNDQITSFKSLWPAIKDNGIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTW CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC WTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFNITSVNGKISKDRRAFGLRER CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCCHHH ESLFDKDSKFHQN HHHHCCCHHCCCC >Mature Secondary Structure MWRGYFKKATNMTFIDIDESCLRFEESEINILIGDQSDKSFLNKVIENHGPFDVIIDDGS CCCCHHHHCCCCEEEECCHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCC HLCNDQITSFKSLWPAIKDNGIYLVEDTHTSYWPGFGGGYRNEASFIEFSKRIVDRMHTW CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC WTDQDELFPYNQQPININSVRFYDSIIAFTKKENRTHPFNITSVNGKISKDRRAFGLRER CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCCHHH ESLFDKDSKFHQN HHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA