Click here to switch to the map view.

The map label for this gene is 124026379

Identifier: 124026379

GI number: 124026379

Start: 1365451

End: 1366854

Strand: Direct

Name: 124026379

Synonym: NATL1_16741

Alternate gene names: NA

Gene position: 1365451-1366854 (Clockwise)

Preceding gene: 124026378

Following gene: 124026384

Centisome position: 73.23

GC content: 29.91

Gene sequence:

>1404_bases
GTGCTTTCAAAAGAAAAAGAATCTGTGGGAGAACAAGAAGGAAAGAAAAAAGTCACTGAAGTAAAAACATTTCCCATTCC
TTTTGCTTTAGAAGAAATAAAAGAAAATATCACCCTTAACACCAAGACTAAATCCCAATTGCCTAAAGAACAAATAATTA
ATCAAGCTTTTAAATTTCATTCACAAGGAAATATTTCAAAGGCAACAAAATATTATCAGATTTGTATAAAACAGGGATTT
AATAATCCACAAGTTTTTTCAAATTTTGGGATTTTATTAAAAGAGATAGATCAATTAAAAGAGGCGGAAAAAATGATTAA
ACAAGCTATTAAATTAAAACCTGATTATGCTATAGCATATAATAACTTGGGAAATATATTAATAGATTTAGGCAGACTAA
AAGAGGCAGAAATATATACTAAAAAAGCTATTGACTTAAAACCTGATTATGCAAATGCTTATAATACATTAGGAAATATA
TTAAAAGAATTGGACAATTTAAAAGATGCCGAAATTTGCTTTTCAAAGGCAATTTCATTGGAGCCAGATCATGAATCAGC
AATTATTAATAGAGGTCAATTATATTTTGATAAAGGAGAATTTAAGAAAGCCTTAAAAGACTCTGACTTATGTAATACAA
AACAATCTAGAGCATTTTCTTTGGAAATTCTTTATTCATTAGGGAGTATCAATGAAATTTATAATAGAATTGAAAAGACC
TATGCATTTGATGATAAAAACTTAAGGTTGGCAGCATTCTCTTCATTTATATCAGAACGGGAAAATAAATATACTCATCA
TAATTTTTGTCCAAAGCCACTTAAATTTCTACATTTCAACAATCTTAAAAATCAACTTAACAATTATGAGGAATTTATAA
AAGGACTACTTAAAGAATTATCTGAGATTAAAACCGTTTGGGAACCACCAAAAAAAACAACTCATAATGGATTTCAAACT
CCAAGTTATATAAATTTGTTTTCAGAATCTTCAATAAAAATTTCAAAACTAAAGGCCATAATCTGTAATGAATTAGATTC
TTATTATCTAAAATTCAAAAGAGAGTCTTGTTCTTATATTAAAAAATGGCCTTCACATAAAAAGCTTTTGGGATGGCATG
TAATCCTGAAGAAGCAAGGATATCAAGAGGCGCACATACATCCAGCTGGCTGGCTAAGTGGAGTTATTTATTTAAAGGTT
GTCCCTTCACTAGGGAAAGATGAGGGGGGAATTGAATTTAGTTTAAATGGGCCGAATTATTCCAATATCAACTCTCCACA
ATTAATTCATCAACCAGAAGTAGGTGATATGGTTTTTTTCCCCTCTTCACTTCACCACAGGACTATCCCTTTCTCTACAG
ATACAGATCGAATAGTCGTGGCTTTTGACTTGATGCCAAATTGA

Upstream 100 bases:

>100_bases
GAATAAGCATTCTGCTCCATAGGGAGCTAATAACTACAGAAGTAAATATTTTATATAGAAAGCATTTTTTCTTATTTTTC
CTAGATTAATATTAAGTGAA

Downstream 100 bases:

>100_bases
TTACTAGATTTTTCTCACTCTATTTTTATACGAGGAGTCAGCAGCTAACCCAGCCAGCGAAATTATTTGTCTAGCGCAGG
CAGCGACACTACTTGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Methyltransferase Type; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; O-GlcNAc Transferase; Sulfotransferase; Flp Pilus Assembly Protein TadD; TPR Repeat; Tetratricopeptide Repeat-Containing Protein; O-Linked N-Acetylglucosamine Transferase; Glycosyl Transferase Family Protein; Sel1 Repeat Family; TPR Domain Containing Protein; SEC-C Motif Domain-Containing Protein; Porphyrin Biosynthesis Protein; Methyltransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Serine/Threonine Kinase; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeats Containing Protein; SPY Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; TPR Repeat-Containing Methyltransferase; Peptidase; Protein Kinase; FkbM Family Methyltransferase

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MLSKEKESVGEQEGKKKVTEVKTFPIPFALEEIKENITLNTKTKSQLPKEQIINQAFKFHSQGNISKATKYYQICIKQGF
NNPQVFSNFGILLKEIDQLKEAEKMIKQAIKLKPDYAIAYNNLGNILIDLGRLKEAEIYTKKAIDLKPDYANAYNTLGNI
LKELDNLKDAEICFSKAISLEPDHESAIINRGQLYFDKGEFKKALKDSDLCNTKQSRAFSLEILYSLGSINEIYNRIEKT
YAFDDKNLRLAAFSSFISERENKYTHHNFCPKPLKFLHFNNLKNQLNNYEEFIKGLLKELSEIKTVWEPPKKTTHNGFQT
PSYINLFSESSIKISKLKAIICNELDSYYLKFKRESCSYIKKWPSHKKLLGWHVILKKQGYQEAHIHPAGWLSGVIYLKV
VPSLGKDEGGIEFSLNGPNYSNINSPQLIHQPEVGDMVFFPSSLHHRTIPFSTDTDRIVVAFDLMPN

Sequences:

>Translated_467_residues
MLSKEKESVGEQEGKKKVTEVKTFPIPFALEEIKENITLNTKTKSQLPKEQIINQAFKFHSQGNISKATKYYQICIKQGF
NNPQVFSNFGILLKEIDQLKEAEKMIKQAIKLKPDYAIAYNNLGNILIDLGRLKEAEIYTKKAIDLKPDYANAYNTLGNI
LKELDNLKDAEICFSKAISLEPDHESAIINRGQLYFDKGEFKKALKDSDLCNTKQSRAFSLEILYSLGSINEIYNRIEKT
YAFDDKNLRLAAFSSFISERENKYTHHNFCPKPLKFLHFNNLKNQLNNYEEFIKGLLKELSEIKTVWEPPKKTTHNGFQT
PSYINLFSESSIKISKLKAIICNELDSYYLKFKRESCSYIKKWPSHKKLLGWHVILKKQGYQEAHIHPAGWLSGVIYLKV
VPSLGKDEGGIEFSLNGPNYSNINSPQLIHQPEVGDMVFFPSSLHHRTIPFSTDTDRIVVAFDLMPN
>Mature_467_residues
MLSKEKESVGEQEGKKKVTEVKTFPIPFALEEIKENITLNTKTKSQLPKEQIINQAFKFHSQGNISKATKYYQICIKQGF
NNPQVFSNFGILLKEIDQLKEAEKMIKQAIKLKPDYAIAYNNLGNILIDLGRLKEAEIYTKKAIDLKPDYANAYNTLGNI
LKELDNLKDAEICFSKAISLEPDHESAIINRGQLYFDKGEFKKALKDSDLCNTKQSRAFSLEILYSLGSINEIYNRIEKT
YAFDDKNLRLAAFSSFISERENKYTHHNFCPKPLKFLHFNNLKNQLNNYEEFIKGLLKELSEIKTVWEPPKKTTHNGFQT
PSYINLFSESSIKISKLKAIICNELDSYYLKFKRESCSYIKKWPSHKKLLGWHVILKKQGYQEAHIHPAGWLSGVIYLKV
VPSLGKDEGGIEFSLNGPNYSNINSPQLIHQPEVGDMVFFPSSLHHRTIPFSTDTDRIVVAFDLMPN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=152, Percent_Identity=27.6315789473684, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI32307150, Length=152, Percent_Identity=27.6315789473684, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI118766330, Length=143, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI118766328, Length=143, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI301336134, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI83415184, Length=184, Percent_Identity=29.8913043478261, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=150, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115532692, Length=153, Percent_Identity=26.797385620915, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17647755, Length=153, Percent_Identity=30.0653594771242, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24585827, Length=153, Percent_Identity=30.0653594771242, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24585829, Length=153, Percent_Identity=30.0653594771242, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24656717, Length=120, Percent_Identity=34.1666666666667, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI18110006, Length=120, Percent_Identity=34.1666666666667, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53654; Mature: 53654

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKEKESVGEQEGKKKVTEVKTFPIPFALEEIKENITLNTKTKSQLPKEQIINQAFKFH
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEECCCHHHHCCHHHHHHHHHHHC
SQGNISKATKYYQICIKQGFNNPQVFSNFGILLKEIDQLKEAEKMIKQAIKLKPDYAIAY
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
NNLGNILIDLGRLKEAEIYTKKAIDLKPDYANAYNTLGNILKELDNLKDAEICFSKAISL
CCCCHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
EPDHESAIINRGQLYFDKGEFKKALKDSDLCNTKQSRAFSLEILYSLGSINEIYNRIEKT
CCCCCHHHHCCCEEEEEHHHHHHHHCCCCCCCCCHHHHEEHHHHHHHCCHHHHHHHHHHH
YAFDDKNLRLAAFSSFISERENKYTHHNFCPKPLKFLHFNNLKNQLNNYEEFIKGLLKEL
HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEIKTVWEPPKKTTHNGFQTPSYINLFSESSIKISKLKAIICNELDSYYLKFKRESCSYI
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKWPSHKKLLGWHVILKKQGYQEAHIHPAGWLSGVIYLKVVPSLGKDEGGIEFSLNGPNY
HHCCCCHHHHHHEEEEECCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCEEEEECCCCC
SNINSPQLIHQPEVGDMVFFPSSLHHRTIPFSTDTDRIVVAFDLMPN
CCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLSKEKESVGEQEGKKKVTEVKTFPIPFALEEIKENITLNTKTKSQLPKEQIINQAFKFH
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEECCCHHHHCCHHHHHHHHHHHC
SQGNISKATKYYQICIKQGFNNPQVFSNFGILLKEIDQLKEAEKMIKQAIKLKPDYAIAY
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
NNLGNILIDLGRLKEAEIYTKKAIDLKPDYANAYNTLGNILKELDNLKDAEICFSKAISL
CCCCHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
EPDHESAIINRGQLYFDKGEFKKALKDSDLCNTKQSRAFSLEILYSLGSINEIYNRIEKT
CCCCCHHHHCCCEEEEEHHHHHHHHCCCCCCCCCHHHHEEHHHHHHHCCHHHHHHHHHHH
YAFDDKNLRLAAFSSFISERENKYTHHNFCPKPLKFLHFNNLKNQLNNYEEFIKGLLKEL
HCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEIKTVWEPPKKTTHNGFQTPSYINLFSESSIKISKLKAIICNELDSYYLKFKRESCSYI
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKWPSHKKLLGWHVILKKQGYQEAHIHPAGWLSGVIYLKVVPSLGKDEGGIEFSLNGPNY
HHCCCCHHHHHHEEEEECCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCEEEEECCCCC
SNINSPQLIHQPEVGDMVFFPSSLHHRTIPFSTDTDRIVVAFDLMPN
CCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA