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The map label for this gene is rsmI [H]

Identifier: 124026373

GI number: 124026373

Start: 1359604

End: 1360680

Strand: Direct

Name: rsmI [H]

Synonym: NATL1_16671

Alternate gene names: 124026373

Gene position: 1359604-1360680 (Clockwise)

Preceding gene: 124026371

Following gene: 124026374

Centisome position: 72.91

GC content: 36.86

Gene sequence:

>1077_bases
ATGTCAGCTGCAGATACTGGGCCGTCACCGCCTTCCTCTACAGTTAATGATTTAGGGAAGCCATATGGAGGTTCATCACC
TCTTGCATATGCCATCAAAACATCAGCGGAAGCCCAGCTAAGCTTTCTAAGCACATCCAATAAAGTCGGTAATTCGACCT
CTTTTGGCACAACAAGATCAATAGACATAATGGATTTAATTGATGAAAATCAACTTCAACAAGAAAGATCAGAACCTTGT
CCAGGGACTCTTTACCTAGTGGGTACGCCAATAGGTAACTTAGGCGATTTATCACCAAGGGCAAAGTCAATACTTAAGAA
TGTTTCACGAATAGCTTGTGAGGATACACGTAGAAGCGGACAATTATTGAAAATAATAAAATCTGAAGTTCCACTACTGA
GCTATCACAAACATAATTTCAAAAGTCGTCAATCTCAATTATTAGAAATCCTAGAATGTGGTGGGAGTCTTGCCTTAATT
AGTGATGCTGGCTTGCCAGGTATAAATGACCCAGGAGAAGAACTTGTTCATGCTGCAAGATCTAATAGTTATGAAGTGAT
TTGCGTACCTGGACCTTGTGCAGCAACAACAGCGTTAGTAATAAGTGGATTGCCCTCAGAGAGATTTTGCTTTGAAGGGT
TTCTACCAAAAAAACAAAGCCTTAGGAAGAAACGTTTGGAAGATATTTCTCAAGAACAAAGAACGACTGTAATCTATGAA
TCACCTCATCAATTAATCAAACTTTTAGAAGATTTATCTATTTCATGCGGAAAAGAACGCCCTATTCAAATCGCGAGAGA
ACTTACAAAAAGATATGAAGAGTCAATAGGTAAGACAATTGAGGAGGTAACAAAATATTTTATTACAAATAAGCCAAAAG
GAGAATTCACCATAGTGCTAGGAGGAAATAATAATAAGCAACAGAATAAAGTAAGTGAATCAGAAGCCTTAAATAAGCTT
AATACATTAATAAATCAAGGAGAAAAATCTAATATTGCAGCGCAAAAAGTCGCAGAAGAAACAGGATATAAAAAAAAATG
GCTTTACTCCAAATTACACAAGAGGCTTGACAAATAA

Upstream 100 bases:

>100_bases
CTGAAAAGTTTTCTCCTTAGAAGTTTCTTCGCTTAAAATATCCCATTCTTTGAAAGCGAGATTATCCTTCAATCCAGAGA
TCAATAATTCATTCACTGCC

Downstream 100 bases:

>100_bases
ACTTTTTCACTTGATGCTAATTAAAAGATAAATTCTAATTATCGAAATTTTTTAAATGTTTTTTAGATTAAAACTTTTAA
CTCTAAATATTTCCACCGCA

Product: putative tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSAADTGPSPPSSTVNDLGKPYGGSSPLAYAIKTSAEAQLSFLSTSNKVGNSTSFGTTRSIDIMDLIDENQLQQERSEPC
PGTLYLVGTPIGNLGDLSPRAKSILKNVSRIACEDTRRSGQLLKIIKSEVPLLSYHKHNFKSRQSQLLEILECGGSLALI
SDAGLPGINDPGEELVHAARSNSYEVICVPGPCAATTALVISGLPSERFCFEGFLPKKQSLRKKRLEDISQEQRTTVIYE
SPHQLIKLLEDLSISCGKERPIQIARELTKRYEESIGKTIEEVTKYFITNKPKGEFTIVLGGNNNKQQNKVSESEALNKL
NTLINQGEKSNIAAQKVAEETGYKKKWLYSKLHKRLDK

Sequences:

>Translated_358_residues
MSAADTGPSPPSSTVNDLGKPYGGSSPLAYAIKTSAEAQLSFLSTSNKVGNSTSFGTTRSIDIMDLIDENQLQQERSEPC
PGTLYLVGTPIGNLGDLSPRAKSILKNVSRIACEDTRRSGQLLKIIKSEVPLLSYHKHNFKSRQSQLLEILECGGSLALI
SDAGLPGINDPGEELVHAARSNSYEVICVPGPCAATTALVISGLPSERFCFEGFLPKKQSLRKKRLEDISQEQRTTVIYE
SPHQLIKLLEDLSISCGKERPIQIARELTKRYEESIGKTIEEVTKYFITNKPKGEFTIVLGGNNNKQQNKVSESEALNKL
NTLINQGEKSNIAAQKVAEETGYKKKWLYSKLHKRLDK
>Mature_357_residues
SAADTGPSPPSSTVNDLGKPYGGSSPLAYAIKTSAEAQLSFLSTSNKVGNSTSFGTTRSIDIMDLIDENQLQQERSEPCP
GTLYLVGTPIGNLGDLSPRAKSILKNVSRIACEDTRRSGQLLKIIKSEVPLLSYHKHNFKSRQSQLLEILECGGSLALIS
DAGLPGINDPGEELVHAARSNSYEVICVPGPCAATTALVISGLPSERFCFEGFLPKKQSLRKKRLEDISQEQRTTVIYES
PHQLIKLLEDLSISCGKERPIQIARELTKRYEESIGKTIEEVTKYFITNKPKGEFTIVLGGNNNKQQNKVSESEALNKLN
TLINQGEKSNIAAQKVAEETGYKKKWLYSKLHKRLDK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=280, Percent_Identity=41.7857142857143, Blast_Score=197, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 39311; Mature: 39180

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADTGPSPPSSTVNDLGKPYGGSSPLAYAIKTSAEAQLSFLSTSNKVGNSTSFGTTRS
CCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC
IDIMDLIDENQLQQERSEPCPGTLYLVGTPIGNLGDLSPRAKSILKNVSRIACEDTRRSG
CHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCH
QLLKIIKSEVPLLSYHKHNFKSRQSQLLEILECGGSLALISDAGLPGINDPGEELVHAAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH
SNSYEVICVPGPCAATTALVISGLPSERFCFEGFLPKKQSLRKKRLEDISQEQRTTVIYE
CCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEC
SPHQLIKLLEDLSISCGKERPIQIARELTKRYEESIGKTIEEVTKYFITNKPKGEFTIVL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GGNNNKQQNKVSESEALNKLNTLINQGEKSNIAAQKVAEETGYKKKWLYSKLHKRLDK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAADTGPSPPSSTVNDLGKPYGGSSPLAYAIKTSAEAQLSFLSTSNKVGNSTSFGTTRS
CCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC
IDIMDLIDENQLQQERSEPCPGTLYLVGTPIGNLGDLSPRAKSILKNVSRIACEDTRRSG
CHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCH
QLLKIIKSEVPLLSYHKHNFKSRQSQLLEILECGGSLALISDAGLPGINDPGEELVHAAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH
SNSYEVICVPGPCAATTALVISGLPSERFCFEGFLPKKQSLRKKRLEDISQEQRTTVIYE
CCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEC
SPHQLIKLLEDLSISCGKERPIQIARELTKRYEESIGKTIEEVTKYFITNKPKGEFTIVL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GGNNNKQQNKVSESEALNKLNTLINQGEKSNIAAQKVAEETGYKKKWLYSKLHKRLDK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]