| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026351
Identifier: 124026351
GI number: 124026351
Start: 1341092
End: 1341520
Strand: Reverse
Name: 124026351
Synonym: NATL1_16451
Alternate gene names: NA
Gene position: 1341520-1341092 (Counterclockwise)
Preceding gene: 124026352
Following gene: 124026348
Centisome position: 71.94
GC content: 34.97
Gene sequence:
>429_bases ATGGATTCTGAAAATACTGTAGTTGATTTTCCAACTGACCAAGAGCAAATAGCTTCAATTATCGAAGATTCATTCCCAAA GAAAAATAGTGATAAAGACCTGGGAAATCCACAATCTGATGCTAATAGATTAGGGGCTAGAATCTTTTTTTTATGGGTTT GGCCAATTGTTGCGGTCAATAAATTTAGAAATTTATTTAGTAGAATGGATTTCGTGAAGCCTTATGAATCTGGTATTAAT GATTCTTACGAGGTTAGTGATACTGAGACTGTTTATACAATGACTAAAGATGCTTTCGCCGGTAAAGGTGGAATGAAATT TATGGGAATTAGATTTATGTCTATTTGGGTTTTTCCGGTTGCAATAACTGGAGCTGTTATTGAGTTCCTTTTCGTTGGCC CACTAAAAGGTACCAATCCATTTGGTTAA
Upstream 100 bases:
>100_bases GTCTTTTTTAATGGTCATTGTTACCAATAAATATTAAATTATTGCTTTAATACAAAAATAATCAATTCATCTTATAATTA TTTCAAATTTCAAGTTTTTG
Downstream 100 bases:
>100_bases AAGTTAATTCAAGAATATTATTTAGGTTTTATAGCTGTTGAAAGTTAAATATATTTTTAGACGTTTCTAAAAGGAAAAAA TGGAGTAACTTTTTTAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MDSENTVVDFPTDQEQIASIIEDSFPKKNSDKDLGNPQSDANRLGARIFFLWVWPIVAVNKFRNLFSRMDFVKPYESGIN DSYEVSDTETVYTMTKDAFAGKGGMKFMGIRFMSIWVFPVAITGAVIEFLFVGPLKGTNPFG
Sequences:
>Translated_142_residues MDSENTVVDFPTDQEQIASIIEDSFPKKNSDKDLGNPQSDANRLGARIFFLWVWPIVAVNKFRNLFSRMDFVKPYESGIN DSYEVSDTETVYTMTKDAFAGKGGMKFMGIRFMSIWVFPVAITGAVIEFLFVGPLKGTNPFG >Mature_142_residues MDSENTVVDFPTDQEQIASIIEDSFPKKNSDKDLGNPQSDANRLGARIFFLWVWPIVAVNKFRNLFSRMDFVKPYESGIN DSYEVSDTETVYTMTKDAFAGKGGMKFMGIRFMSIWVFPVAITGAVIEFLFVGPLKGTNPFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15968; Mature: 15968
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSENTVVDFPTDQEQIASIIEDSFPKKNSDKDLGNPQSDANRLGARIFFLWVWPIVAVN CCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KFRNLFSRMDFVKPYESGINDSYEVSDTETVYTMTKDAFAGKGGMKFMGIRFMSIWVFPV HHHHHHHHHHHCCHHHHCCCCCEECCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHH AITGAVIEFLFVGPLKGTNPFG HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDSENTVVDFPTDQEQIASIIEDSFPKKNSDKDLGNPQSDANRLGARIFFLWVWPIVAVN CCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KFRNLFSRMDFVKPYESGINDSYEVSDTETVYTMTKDAFAGKGGMKFMGIRFMSIWVFPV HHHHHHHHHHHCCHHHHCCCCCEECCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHH AITGAVIEFLFVGPLKGTNPFG HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA