Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026348

Identifier: 124026348

GI number: 124026348

Start: 1340169

End: 1340435

Strand: Reverse

Name: 124026348

Synonym: NATL1_16421

Alternate gene names: NA

Gene position: 1340435-1340169 (Counterclockwise)

Preceding gene: 124026351

Following gene: 124026347

Centisome position: 71.88

GC content: 26.22

Gene sequence:

>267_bases
ATGAGTGATCAGTCTGAATTTAATGATGAGCCTTTAAAGGATAAATTGGAAATTTTATTAGATGAAGATAATGAGATTAA
AAAATGGAATGAAGGCCTATTAATAAAATTACTTATACTTTTGCCCGTAATAATTTTTATAGTAGGTTTATTTATAGTGA
ATAGACCAGAAACATTAACAGATATACTATTTGTATTTATTTACCCGTTAGCCCTAATATTGATAGGTTTGATACTCCTA
TTTGTTATGAGAAGCAAATTAAAATAG

Upstream 100 bases:

>100_bases
TAATTAAAGTTACTCATTTTTTTATAAAAATAGTTATTGATGAAAACTATATAGTAAATTATTATGTAGTTCTATCTTGC
ATTAATAATATCAAAATCTT

Downstream 100 bases:

>100_bases
AAGATATTAATAGAATCTTTTTGCTTTAAATCTGTGTTCTCATGTAGCCAATAAGGTAGTCCCACTGTAAGCTATTAGTA
ATTAAACATTAATATCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSDQSEFNDEPLKDKLEILLDEDNEIKKWNEGLLIKLLILLPVIIFIVGLFIVNRPETLTDILFVFIYPLALILIGLILL
FVMRSKLK

Sequences:

>Translated_88_residues
MSDQSEFNDEPLKDKLEILLDEDNEIKKWNEGLLIKLLILLPVIIFIVGLFIVNRPETLTDILFVFIYPLALILIGLILL
FVMRSKLK
>Mature_87_residues
SDQSEFNDEPLKDKLEILLDEDNEIKKWNEGLLIKLLILLPVIIFIVGLFIVNRPETLTDILFVFIYPLALILIGLILLF
VMRSKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10226; Mature: 10094

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQSEFNDEPLKDKLEILLDEDNEIKKWNEGLLIKLLILLPVIIFIVGLFIVNRPETLT
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DILFVFIYPLALILIGLILLFVMRSKLK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDQSEFNDEPLKDKLEILLDEDNEIKKWNEGLLIKLLILLPVIIFIVGLFIVNRPETLT
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DILFVFIYPLALILIGLILLFVMRSKLK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA