Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026302

Identifier: 124026302

GI number: 124026302

Start: 1306535

End: 1307113

Strand: Direct

Name: 124026302

Synonym: NATL1_15961

Alternate gene names: NA

Gene position: 1306535-1307113 (Clockwise)

Preceding gene: 124026297

Following gene: 124026303

Centisome position: 70.07

GC content: 39.03

Gene sequence:

>579_bases
ATGAGCCTTACCGCGATCGAATGTCCAGATGGTGTATGTCATAGCCATCACGGTGGCCATGCTGTTCCCAGAACAGCCAT
GCAAAAGAATCTTCAAAGTCATGGCAAAGAGTGGTGCGAGCGCTTGGCAGAACGAATTTATGAAATGTCTGTAGACACTT
ATTCTCAGACAGTCATGCCTAGCCTTCATTCATCTGGATGGCAAAGAAAACATCTTGATTGGGAATTCAAGCTAGCGAAT
AAAGAATCTGAGCCTGACGAAACGTTGGTTGAGGGAATCATTAATGCCACTGAAAGTTTTTTGAGAAGCAGTGAAGTTCA
TCGCTTATTTATACAAGAACTTGTACAAGGAACGTTTGCCGAAGCAAAAGATGACAAATTGCCATCTAAAGCTGTCAGGA
AAGTAATAGAAAATGAAATAATAGTAATGATCGAAGGGAAGAAAGAAGAATTAACAAATAGGATTGCTAAGGCATTGAAA
GAAGAGGCGAAAGGAGACTTAGAATTAGCAAAAAATGCAGCGATTGAAGGTATTAATGATGTTGAAAAACTATTGATAAA
TCATACAGAGTCAGTTTAA

Upstream 100 bases:

>100_bases
AGTAAACGTTTGAATACCAGCATTTTTAGTTAAGAAAGGTTTTCTTAATAGTTTTTCTTGGCTATGAAGTTATTGAGAAA
AAAGTTATCGATCAGAAAAA

Downstream 100 bases:

>100_bases
TCAGCCAGGTAATCCGTATTAATATATTCCTTAGATTTACTATTAATATCTTAGTCAACAAACACCTAGATAACCTTTTC
TCAATTATTAAGAAAATCTA

Product: EF-1 guanine nucleotide exchange doma

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSLTAIECPDGVCHSHHGGHAVPRTAMQKNLQSHGKEWCERLAERIYEMSVDTYSQTVMPSLHSSGWQRKHLDWEFKLAN
KESEPDETLVEGIINATESFLRSSEVHRLFIQELVQGTFAEAKDDKLPSKAVRKVIENEIIVMIEGKKEELTNRIAKALK
EEAKGDLELAKNAAIEGINDVEKLLINHTESV

Sequences:

>Translated_192_residues
MSLTAIECPDGVCHSHHGGHAVPRTAMQKNLQSHGKEWCERLAERIYEMSVDTYSQTVMPSLHSSGWQRKHLDWEFKLAN
KESEPDETLVEGIINATESFLRSSEVHRLFIQELVQGTFAEAKDDKLPSKAVRKVIENEIIVMIEGKKEELTNRIAKALK
EEAKGDLELAKNAAIEGINDVEKLLINHTESV
>Mature_191_residues
SLTAIECPDGVCHSHHGGHAVPRTAMQKNLQSHGKEWCERLAERIYEMSVDTYSQTVMPSLHSSGWQRKHLDWEFKLANK
ESEPDETLVEGIINATESFLRSSEVHRLFIQELVQGTFAEAKDDKLPSKAVRKVIENEIIVMIEGKKEELTNRIAKALKE
EAKGDLELAKNAAIEGINDVEKLLINHTESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21658; Mature: 21527

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTAIECPDGVCHSHHGGHAVPRTAMQKNLQSHGKEWCERLAERIYEMSVDTYSQTVMP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLHSSGWQRKHLDWEFKLANKESEPDETLVEGIINATESFLRSSEVHRLFIQELVQGTFA
HHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKDDKLPSKAVRKVIENEIIVMIEGKKEELTNRIAKALKEEAKGDLELAKNAAIEGIND
HCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
VEKLLINHTESV
HHHHHHHHCCCC
>Mature Secondary Structure 
SLTAIECPDGVCHSHHGGHAVPRTAMQKNLQSHGKEWCERLAERIYEMSVDTYSQTVMP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLHSSGWQRKHLDWEFKLANKESEPDETLVEGIINATESFLRSSEVHRLFIQELVQGTFA
HHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKDDKLPSKAVRKVIENEIIVMIEGKKEELTNRIAKALKEEAKGDLELAKNAAIEGIND
HCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
VEKLLINHTESV
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA