| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is hisH [H]
Identifier: 124026232
GI number: 124026232
Start: 1243137
End: 1243766
Strand: Direct
Name: hisH [H]
Synonym: NATL1_15261
Alternate gene names: 124026232
Gene position: 1243137-1243766 (Clockwise)
Preceding gene: 124026231
Following gene: 124026233
Centisome position: 66.67
GC content: 33.65
Gene sequence:
>630_bases TTGACAAAAATTGGATTAATAGATTATGGAATGGGTAATCTTTTTTCCGTTCAGCAAGCATTTAAAAGGTTTAATCAGCC TTTAGATATTATTTCTGATATCAAAACACTTCAGTCTTCTGATGCTTTAATTCTTCCCGGAGTTGGTGCTTTTGATCCCG CAATGATGAATTTAAGAAAAACTGAACTAGTACCTTCAATAATTGACTGGATAAATAATGGCAAACCACTTTTTGGAATT TGTTTAGGATTACAGCTTTTATTTGAGACAAGTGATGAGGGGACTTCAGAAGGATTAGGAGTTATCAAAGGTCATATTCG CAGATTACCTCAAGAAAAAGACGAAAGGATTCCTCATATTGGTTGGTCTCCAATATATAAAACAAATGAATGTCCTATTC TAGAAAATTATCCTGGTTCTAATTGGATGTATTTCGTCCATTCCTACTCAGCATGTCCTTTAGAACCAAAACATACCGTA GCCGTAACAAAATTTGGTAAAACTGATGTCTCATCTATGGTCTGGCATAAAAATACTGGTGCCTGTCAGTTTCATCCCGA AAAGTCAGGAGTTGCAGGACAAAAAATTATTTTTAATTGGATTAATTGGTTAAAAAAAAACAAATTTTAG
Upstream 100 bases:
>100_bases AGTCCCTAAAGCCACCCTCTCAGGAACAATTTCCAAACATCTCTAATCCCAAAATTTAGAAGTTCTAGAGCCCAATTCAA ATGATTCATAGGTAAATCTT
Downstream 100 bases:
>100_bases TTTGAAAAGGAAATTGAAATTAATGTCTGGGAAAAGGATAGAAAGTCCTTTAAGCCAAAAGACAAGACCAACCTCCTCAA AAGTAAGAGAGGCACTAATA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTKIGLIDYGMGNLFSVQQAFKRFNQPLDIISDIKTLQSSDALILPGVGAFDPAMMNLRKTELVPSIIDWINNGKPLFGI CLGLQLLFETSDEGTSEGLGVIKGHIRRLPQEKDERIPHIGWSPIYKTNECPILENYPGSNWMYFVHSYSACPLEPKHTV AVTKFGKTDVSSMVWHKNTGACQFHPEKSGVAGQKIIFNWINWLKKNKF
Sequences:
>Translated_209_residues MTKIGLIDYGMGNLFSVQQAFKRFNQPLDIISDIKTLQSSDALILPGVGAFDPAMMNLRKTELVPSIIDWINNGKPLFGI CLGLQLLFETSDEGTSEGLGVIKGHIRRLPQEKDERIPHIGWSPIYKTNECPILENYPGSNWMYFVHSYSACPLEPKHTV AVTKFGKTDVSSMVWHKNTGACQFHPEKSGVAGQKIIFNWINWLKKNKF >Mature_208_residues TKIGLIDYGMGNLFSVQQAFKRFNQPLDIISDIKTLQSSDALILPGVGAFDPAMMNLRKTELVPSIIDWINNGKPLFGIC LGLQLLFETSDEGTSEGLGVIKGHIRRLPQEKDERIPHIGWSPIYKTNECPILENYPGSNWMYFVHSYSACPLEPKHTVA VTKFGKTDVSSMVWHKNTGACQFHPEKSGVAGQKIIFNWINWLKKNKF
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=197, Percent_Identity=33.502538071066, Blast_Score=100, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6319725, Length=217, Percent_Identity=33.1797235023041, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 23541; Mature: 23409
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIGLIDYGMGNLFSVQQAFKRFNQPLDIISDIKTLQSSDALILPGVGAFDPAMMNLRK CCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH TELVPSIIDWINNGKPLFGICLGLQLLFETSDEGTSEGLGVIKGHIRRLPQEKDERIPHI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCC GWSPIYKTNECPILENYPGSNWMYFVHSYSACPLEPKHTVAVTKFGKTDVSSMVWHKNTG CCCCCEECCCCCEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHEECCCC ACQFHPEKSGVAGQKIIFNWINWLKKNKF CEEECCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKIGLIDYGMGNLFSVQQAFKRFNQPLDIISDIKTLQSSDALILPGVGAFDPAMMNLRK CEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHH TELVPSIIDWINNGKPLFGICLGLQLLFETSDEGTSEGLGVIKGHIRRLPQEKDERIPHI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCC GWSPIYKTNECPILENYPGSNWMYFVHSYSACPLEPKHTVAVTKFGKTDVSSMVWHKNTG CCCCCEECCCCCEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHEECCCC ACQFHPEKSGVAGQKIIFNWINWLKKNKF CEEECCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA