| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026201
Identifier: 124026201
GI number: 124026201
Start: 1206892
End: 1207524
Strand: Direct
Name: 124026201
Synonym: NATL1_14951
Alternate gene names: NA
Gene position: 1206892-1207524 (Clockwise)
Preceding gene: 124026200
Following gene: 124026204
Centisome position: 64.72
GC content: 23.85
Gene sequence:
>633_bases ATGATAGCCAAGTCGATTAAAGAGAAAGGAATTCTTACTAAATTATTAGAGAAAGGTATAAAGTTTCTAGTCATAAAAGA GTGTAAAAAGATTAGAAATCTTAAAATAGATATTATTTCCACTTCTACTCAAATATTTAAAGGTGTAATACAAAAAATTA ATATTTCCGCTGAGGATATTAATTATAAGGATCTTTTTTTTGATGAACTCCAGATAGGAGCAGATAATCTTAAAATCAAT TTTAAATTAACCACTAAAGAGTTAAAATTTACAAATGATCCGTTAATCAAATTCAAAATTTCTTTAACTCAAAGTTCACT CAGAACAATTCTATTGTCAAAAAGTTGGCATTGGATTGGAGATAAAATTAGCAAGGAAATATTAAACCAAGAAAAATTAA TAGATATAAAAATAATGAATGGTCAGTTATTAATAAAAACTTCTAAAGATGATATCAATATTATTAAAGAGCAACATATT AATGTTACAGCAGAGAAAGGTAAAGTCTATCTGAACAATGAAGCTTATAACAAGATAATTGAGATCCCGGTTGAAGATAA AATATATATTAAAAAAATATATATAGAAAATAAATTAATTAATATTTTCGCAAGTTCATCTATTAGTTTTTAA
Upstream 100 bases:
>100_bases TATAACTCCAACATAGAAATAGCATTAAATTCAGGACATCTTCCACACTTGGAAGAACCAAAGTTAGTTGCTGATGCTTG GGGACAACTAAAGAAATGAA
Downstream 100 bases:
>100_bases TTATTTCAGGAAATAATTAATGGAGACAGTAATAATACGATATAAAATACAATAGCTGGAGTAAATAAATAACTATCGAT TCTATCGAGAATCCCTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIAKSIKEKGILTKLLEKGIKFLVIKECKKIRNLKIDIISTSTQIFKGVIQKINISAEDINYKDLFFDELQIGADNLKIN FKLTTKELKFTNDPLIKFKISLTQSSLRTILLSKSWHWIGDKISKEILNQEKLIDIKIMNGQLLIKTSKDDINIIKEQHI NVTAEKGKVYLNNEAYNKIIEIPVEDKIYIKKIYIENKLINIFASSSISF
Sequences:
>Translated_210_residues MIAKSIKEKGILTKLLEKGIKFLVIKECKKIRNLKIDIISTSTQIFKGVIQKINISAEDINYKDLFFDELQIGADNLKIN FKLTTKELKFTNDPLIKFKISLTQSSLRTILLSKSWHWIGDKISKEILNQEKLIDIKIMNGQLLIKTSKDDINIIKEQHI NVTAEKGKVYLNNEAYNKIIEIPVEDKIYIKKIYIENKLINIFASSSISF >Mature_210_residues MIAKSIKEKGILTKLLEKGIKFLVIKECKKIRNLKIDIISTSTQIFKGVIQKINISAEDINYKDLFFDELQIGADNLKIN FKLTTKELKFTNDPLIKFKISLTQSSLRTILLSKSWHWIGDKISKEILNQEKLIDIKIMNGQLLIKTSKDDINIIKEQHI NVTAEKGKVYLNNEAYNKIIEIPVEDKIYIKKIYIENKLINIFASSSISF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24259; Mature: 24259
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAKSIKEKGILTKLLEKGIKFLVIKECKKIRNLKIDIISTSTQIFKGVIQKINISAEDI CCCCHHHHCHHHHHHHHCCCCEEEHHHHHHHCCEEEEEEECHHHHHHHHHHHCCCCCCCC NYKDLFFDELQIGADNLKINFKLTTKELKFTNDPLIKFKISLTQSSLRTILLSKSWHWIG CHHHEEHHHHEECCCCEEEEEEEEEEEEEECCCCEEEEEEEECHHHHHEEEECCCCCHHH DKISKEILNQEKLIDIKIMNGQLLIKTSKDDINIIKEQHINVTAEKGKVYLNNEAYNKII HHHHHHHCCCCCEEEEEEECCEEEEEECCCCCEEEECCCCEEEEECCEEEECCCCCCEEE EIPVEDKIYIKKIYIENKLINIFASSSISF ECCCCCCEEEEEEEECCEEEEEEECCCCCC >Mature Secondary Structure MIAKSIKEKGILTKLLEKGIKFLVIKECKKIRNLKIDIISTSTQIFKGVIQKINISAEDI CCCCHHHHCHHHHHHHHCCCCEEEHHHHHHHCCEEEEEEECHHHHHHHHHHHCCCCCCCC NYKDLFFDELQIGADNLKINFKLTTKELKFTNDPLIKFKISLTQSSLRTILLSKSWHWIG CHHHEEHHHHEECCCCEEEEEEEEEEEEEECCCCEEEEEEEECHHHHHEEEECCCCCHHH DKISKEILNQEKLIDIKIMNGQLLIKTSKDDINIIKEQHINVTAEKGKVYLNNEAYNKII HHHHHHHCCCCCEEEEEEECCEEEEEECCCCCEEEECCCCEEEEECCEEEECCCCCCEEE EIPVEDKIYIKKIYIENKLINIFASSSISF ECCCCCCEEEEEEEECCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA