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The map label for this gene is ydhD [C]

Identifier: 124026177

GI number: 124026177

Start: 1177945

End: 1178268

Strand: Reverse

Name: ydhD [C]

Synonym: NATL1_14711

Alternate gene names: 124026177

Gene position: 1178268-1177945 (Counterclockwise)

Preceding gene: 124026178

Following gene: 124026175

Centisome position: 63.19

GC content: 33.02

Gene sequence:

>324_bases
ATGGATTCCAACACTCGCTCAAAGATTGAAAGCTTAATTAATTCAAAACCAATATTTGTTTTTATGAAAGGCAATAAGTT
GATGCCACAATGTGGTTTTTCTAACAATGTTGTTCAAATTCTAAATTCATTGGGGATGAGCTTTGAAACGTTTGATGTCC
TTTCAGATATGGAAATCCGAGAGGGTATAAAAGAATATTCAAATTGGCCGACAATACCCCAAGTCTATTTAAAAGGAGAA
TTTATGGGTGGCTCAGATATATTGATAAGCATGTATAACTCTGGAGAATTGAAAGAAAAGTTAGAAATTGCACTAGCTTC
ATAA

Upstream 100 bases:

>100_bases
CAACATCAACTTGTTTATGGTGCGTTAAAAAATGAATTGAAAACCGAAACAATTCATGCTTTGGCCTTGAAAACCTCAAC
ACCTCATTAATTTTCCCGTC

Downstream 100 bases:

>100_bases
CTTGTGACTTTTGATTTTTAGCCTGGATCTTTTTGGAAAAAGAGGTTATTAATGTCACCATCAGGACCAATAAAGCTTGA
AGGATCCATAATCCATCTAT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDSNTRSKIESLINSKPIFVFMKGNKLMPQCGFSNNVVQILNSLGMSFETFDVLSDMEIREGIKEYSNWPTIPQVYLKGE
FMGGSDILISMYNSGELKEKLEIALAS

Sequences:

>Translated_107_residues
MDSNTRSKIESLINSKPIFVFMKGNKLMPQCGFSNNVVQILNSLGMSFETFDVLSDMEIREGIKEYSNWPTIPQVYLKGE
FMGGSDILISMYNSGELKEKLEIALAS
>Mature_107_residues
MDSNTRSKIESLINSKPIFVFMKGNKLMPQCGFSNNVVQILNSLGMSFETFDVLSDMEIREGIKEYSNWPTIPQVYLKGE
FMGGSDILISMYNSGELKEKLEIALAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=96, Percent_Identity=53.125, Blast_Score=116, Evalue=4e-27,
Organism=Homo sapiens, GI95113651, Length=90, Percent_Identity=51.1111111111111, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787943, Length=97, Percent_Identity=44.3298969072165, Blast_Score=101, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17556042, Length=98, Percent_Identity=48.9795918367347, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71988159, Length=95, Percent_Identity=43.1578947368421, Blast_Score=102, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=95, Percent_Identity=43.1578947368421, Blast_Score=102, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=109, Percent_Identity=46.7889908256881, Blast_Score=108, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=82, Percent_Identity=43.9024390243902, Blast_Score=90, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=82, Percent_Identity=42.6829268292683, Blast_Score=89, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24642023, Length=99, Percent_Identity=47.4747474747475, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=46.3157894736842, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12037; Mature: 12037

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNTRSKIESLINSKPIFVFMKGNKLMPQCGFSNNVVQILNSLGMSFETFDVLSDMEIR
CCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCHHHHHHHHCCCCHHHHHHCCCHHH
EGIKEYSNWPTIPQVYLKGEFMGGSDILISMYNSGELKEKLEIALAS
HHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHEEECC
>Mature Secondary Structure
MDSNTRSKIESLINSKPIFVFMKGNKLMPQCGFSNNVVQILNSLGMSFETFDVLSDMEIR
CCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCHHHHHHHHCCCCHHHHHHCCCHHH
EGIKEYSNWPTIPQVYLKGEFMGGSDILISMYNSGELKEKLEIALAS
HHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]