| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025807
Identifier: 124025807
GI number: 124025807
Start: 1002168
End: 1002710
Strand: Reverse
Name: 124025807
Synonym: NATL1_11001
Alternate gene names: NA
Gene position: 1002710-1002168 (Counterclockwise)
Preceding gene: 124025808
Following gene: 124025800
Centisome position: 53.77
GC content: 25.6
Gene sequence:
>543_bases ATGAGTGGTTGGCTTTACTTAATAAGAAATAGAGATTTATATAAGATTGGAATAACAAAAAACTTTGAAAATAGGATGAG ACAACTCAAGCCAGATAAAGTTGTTGCTAAATTTTATAGTACTGATTTTGTGAAACTAGAAAGAGAGTTACATCATCGCT ATAAAAAGTTCAGAATCCCTCAGACGGAGTACTTTAGATTGGAAAATTCTCATGTTAAAGAGATAAAACAAAGAATTTAC ATACTTAATTATCCTTTAAGTTTAACTTTTGGCATTTGTATAAAATCAATATTATTATTATTATTATTATTTTTTCTTAC AATAGTAGTTATATCTTTGTATATTAATGACTTAAGTTTGGCTACATATAATTCACTTTTTTGGATTGAGCGAATTTCAT TTGGACTAGCCTTTATTTCTTTATTTGTTTATTCAGGTAAATATTTAAGTTTTTGGAATGAGTTAAAATATAGATCCACT AGATTAATTATTTTTCTTTTCTTTTCTTTCTTATTTCGTCTTGCAGCTAGCTTTTTCTCTTAA
Upstream 100 bases:
>100_bases AGAAATAATCCTACGATGAGAGAAAAATTTAACTCAATTAGAAAAAGTGATGCTGCATAATTTACTTATAAATCTTGAAT AAGTAAGAGTTTAAATTTAT
Downstream 100 bases:
>100_bases AATATATTCAATATCAGTGATATATATCAAAATTATACATTTATGATCTTTAAACTTACCACATGTCTTTGCTTGACTCG TCTTCTTGTTGTTGCTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSGWLYLIRNRDLYKIGITKNFENRMRQLKPDKVVAKFYSTDFVKLERELHHRYKKFRIPQTEYFRLENSHVKEIKQRIY ILNYPLSLTFGICIKSILLLLLLFFLTIVVISLYINDLSLATYNSLFWIERISFGLAFISLFVYSGKYLSFWNELKYRST RLIIFLFFSFLFRLAASFFS
Sequences:
>Translated_180_residues MSGWLYLIRNRDLYKIGITKNFENRMRQLKPDKVVAKFYSTDFVKLERELHHRYKKFRIPQTEYFRLENSHVKEIKQRIY ILNYPLSLTFGICIKSILLLLLLFFLTIVVISLYINDLSLATYNSLFWIERISFGLAFISLFVYSGKYLSFWNELKYRST RLIIFLFFSFLFRLAASFFS >Mature_179_residues SGWLYLIRNRDLYKIGITKNFENRMRQLKPDKVVAKFYSTDFVKLERELHHRYKKFRIPQTEYFRLENSHVKEIKQRIYI LNYPLSLTFGICIKSILLLLLLFFLTIVVISLYINDLSLATYNSLFWIERISFGLAFISLFVYSGKYLSFWNELKYRSTR LIIFLFFSFLFRLAASFFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21788; Mature: 21657
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWLYLIRNRDLYKIGITKNFENRMRQLKPDKVVAKFYSTDFVKLERELHHRYKKFRIP CCCEEEEEECCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QTEYFRLENSHVKEIKQRIYILNYPLSLTFGICIKSILLLLLLFFLTIVVISLYINDLSL CHHHHCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATYNSLFWIERISFGLAFISLFVYSGKYLSFWNELKYRSTRLIIFLFFSFLFRLAASFFS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGWLYLIRNRDLYKIGITKNFENRMRQLKPDKVVAKFYSTDFVKLERELHHRYKKFRIP CCEEEEEECCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QTEYFRLENSHVKEIKQRIYILNYPLSLTFGICIKSILLLLLLFFLTIVVISLYINDLSL CHHHHCCCCHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATYNSLFWIERISFGLAFISLFVYSGKYLSFWNELKYRSTRLIIFLFFSFLFRLAASFFS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA