| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025808
Identifier: 124025808
GI number: 124025808
Start: 1002751
End: 1004043
Strand: Reverse
Name: 124025808
Synonym: NATL1_11011
Alternate gene names: NA
Gene position: 1004043-1002751 (Counterclockwise)
Preceding gene: 124025809
Following gene: 124025807
Centisome position: 53.84
GC content: 30.86
Gene sequence:
>1293_bases ATGAATGAAATCAAATGTCCTGAATGTGGTAGTACGATCAGCATTGATGAAGATAGTTACTCAAATATTATTAAGCAGGT AAGAGATCAGGAGTTTGAAGATGAAATGAAGAAAAGACTTGAAATTCTTGAAAGGGATAAACAGAAATCCGTTGATCTTG CTATTCAAAATCATCGTTTACAAATGCAAGAGGCAGCATTTATAAATGAAAAAAAAATGCAAGGCCTTCAGTCTCAATTG ATTTCTGCCCAGGCTGAAAAAACTATGACTGTGAACAAGATTAAACATAACTTTGAAAAAGAGAGAGACTCACTTGAGTA TTTATTGGAGAAAACAAGAGAAAAGAATGAATTTGATAAAAAACTTGCTGTATCTGACGCAATTACTGAATTAAAAGAAG GCTATGAAAAACTCAAAAATAACTTAGATAAAGTTGAACTGCAAAAGGAATTATCTGAAAAATCTTTGAAAATGAGATAT GAGATTCAGTTAAAAGATCGAGAAGATTTAATTGAGAGACTTCGTGATATGAAAACAAAATTGTCGACTAAAATGGTTGG TGAGTCTCTTGAGCAACATTGCGAAAATGAATTTAATCGAATAAGGGCGACAGCGTTTCCTAATGCATATTTTGACAAAG ATAATGATGCTAGTTTTGGTAGTAAAGGTGATTATATCTTTCGTGACTGTGATAGTAAAGGGAACGAAATAGTCTCTATT ATGTTTGAAATGAAAAACGAATGTGATAGCACTTCTAGCAAGAAGAAGAATGAGGATTTTCTTAAAGAGTTAAACAAAGA TCGTTTAGAAAAAAATTGCGAATATGCTGTATTAGTTTCTTTACTAGAATCTGATAATGACTTATTTAATGCTGGAATTG TTGATTTTTCATATCGGTATCCAAAAATGTATGTTGTTCGTCCTCAATGTTTTTTACCAATAATTTCTTTATTAAGGAAT GCTTCACTTAAGGCTCTTGAGTATAAATCAGAACTAGCAGCTATTAAAGAGCAGAATATTGATATTACAAATTTTGAAAA TAGTCTTGAACTATTTAAGGATTCTTTTGGTAAAAATTATGCTCTAGCTTCAAAACGTTTTGAAACAGCAATTATGGAGA TTGATAAATCTATTAATCACTTGCAAAAAACCAAAGATGCATTACTTGGCGCTGATAGAAACCTTAGATTAGCTAATGAT AAAGCACAAGATGTTTCGGTTAAAAGATTAACCAGAAATAATCCTACGATGAGAGAAAAATTTAACTCAATTAGAAAAAG TGATGCTGCATAA
Upstream 100 bases:
>100_bases CCATCTTGGCAACTGGTTTTTGGGTTTAACATAATTCTTGCTTGTCGAAGCGAAACAAGATAAAAAGAGTAAATAAATTG TGTGTCTCTTTTGCTCAGAT
Downstream 100 bases:
>100_bases TTTACTTATAAATCTTGAATAAGTAAGAGTTTAAATTTATATGAGTGGTTGGCTTTACTTAATAAGAAATAGAGATTTAT ATAAGATTGGAATAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MNEIKCPECGSTISIDEDSYSNIIKQVRDQEFEDEMKKRLEILERDKQKSVDLAIQNHRLQMQEAAFINEKKMQGLQSQL ISAQAEKTMTVNKIKHNFEKERDSLEYLLEKTREKNEFDKKLAVSDAITELKEGYEKLKNNLDKVELQKELSEKSLKMRY EIQLKDREDLIERLRDMKTKLSTKMVGESLEQHCENEFNRIRATAFPNAYFDKDNDASFGSKGDYIFRDCDSKGNEIVSI MFEMKNECDSTSSKKKNEDFLKELNKDRLEKNCEYAVLVSLLESDNDLFNAGIVDFSYRYPKMYVVRPQCFLPIISLLRN ASLKALEYKSELAAIKEQNIDITNFENSLELFKDSFGKNYALASKRFETAIMEIDKSINHLQKTKDALLGADRNLRLAND KAQDVSVKRLTRNNPTMREKFNSIRKSDAA
Sequences:
>Translated_430_residues MNEIKCPECGSTISIDEDSYSNIIKQVRDQEFEDEMKKRLEILERDKQKSVDLAIQNHRLQMQEAAFINEKKMQGLQSQL ISAQAEKTMTVNKIKHNFEKERDSLEYLLEKTREKNEFDKKLAVSDAITELKEGYEKLKNNLDKVELQKELSEKSLKMRY EIQLKDREDLIERLRDMKTKLSTKMVGESLEQHCENEFNRIRATAFPNAYFDKDNDASFGSKGDYIFRDCDSKGNEIVSI MFEMKNECDSTSSKKKNEDFLKELNKDRLEKNCEYAVLVSLLESDNDLFNAGIVDFSYRYPKMYVVRPQCFLPIISLLRN ASLKALEYKSELAAIKEQNIDITNFENSLELFKDSFGKNYALASKRFETAIMEIDKSINHLQKTKDALLGADRNLRLAND KAQDVSVKRLTRNNPTMREKFNSIRKSDAA >Mature_430_residues MNEIKCPECGSTISIDEDSYSNIIKQVRDQEFEDEMKKRLEILERDKQKSVDLAIQNHRLQMQEAAFINEKKMQGLQSQL ISAQAEKTMTVNKIKHNFEKERDSLEYLLEKTREKNEFDKKLAVSDAITELKEGYEKLKNNLDKVELQKELSEKSLKMRY EIQLKDREDLIERLRDMKTKLSTKMVGESLEQHCENEFNRIRATAFPNAYFDKDNDASFGSKGDYIFRDCDSKGNEIVSI MFEMKNECDSTSSKKKNEDFLKELNKDRLEKNCEYAVLVSLLESDNDLFNAGIVDFSYRYPKMYVVRPQCFLPIISLLRN ASLKALEYKSELAAIKEQNIDITNFENSLELFKDSFGKNYALASKRFETAIMEIDKSINHLQKTKDALLGADRNLRLAND KAQDVSVKRLTRNNPTMREKFNSIRKSDAA
Specific function: Unknown
COG id: COG4487
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019219 [H]
Pfam domain/function: PF09903 DUF2130 [H]
EC number: NA
Molecular weight: Translated: 50086; Mature: 50086
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIKCPECGSTISIDEDSYSNIIKQVRDQEFEDEMKKRLEILERDKQKSVDLAIQNHRL CCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMQEAAFINEKKMQGLQSQLISAQAEKTMTVNKIKHNFEKERDSLEYLLEKTREKNEFDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAVSDAITELKEGYEKLKNNLDKVELQKELSEKSLKMRYEIQLKDREDLIERLRDMKTK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHH LSTKMVGESLEQHCENEFNRIRATAFPNAYFDKDNDASFGSKGDYIFRDCDSKGNEIVSI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHH MFEMKNECDSTSSKKKNEDFLKELNKDRLEKNCEYAVLVSLLESDNDLFNAGIVDFSYRY HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCEEEECCC PKMYVVRPQCFLPIISLLRNASLKALEYKSELAAIKEQNIDITNFENSLELFKDSFGKNY CEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCH ALASKRFETAIMEIDKSINHLQKTKDALLGADRNLRLANDKAQDVSVKRLTRNNPTMREK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCHHHHH FNSIRKSDAA HHHHHHCCCC >Mature Secondary Structure MNEIKCPECGSTISIDEDSYSNIIKQVRDQEFEDEMKKRLEILERDKQKSVDLAIQNHRL CCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMQEAAFINEKKMQGLQSQLISAQAEKTMTVNKIKHNFEKERDSLEYLLEKTREKNEFDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAVSDAITELKEGYEKLKNNLDKVELQKELSEKSLKMRYEIQLKDREDLIERLRDMKTK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHH LSTKMVGESLEQHCENEFNRIRATAFPNAYFDKDNDASFGSKGDYIFRDCDSKGNEIVSI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHH MFEMKNECDSTSSKKKNEDFLKELNKDRLEKNCEYAVLVSLLESDNDLFNAGIVDFSYRY HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCEEEECCC PKMYVVRPQCFLPIISLLRNASLKALEYKSELAAIKEQNIDITNFENSLELFKDSFGKNY CEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCH ALASKRFETAIMEIDKSINHLQKTKDALLGADRNLRLANDKAQDVSVKRLTRNNPTMREK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCHHHHH FNSIRKSDAA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]