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The map label for this gene is thf1

Identifier: 124025670

GI number: 124025670

Start: 883527

End: 884126

Strand: Reverse

Name: thf1

Synonym: NATL1_09631

Alternate gene names: 124025670

Gene position: 884126-883527 (Counterclockwise)

Preceding gene: 124025672

Following gene: 124025668

Centisome position: 47.41

GC content: 31.17

Gene sequence:

>600_bases
TTGAGCGTTAGAGCAACAATTTCAGACAGCAAATCTGACTTCCATAAGGAATTTCCTTATGTAATTCCAGCTATTTATAG
AAAGCTCGCAGATGAACTGCTAGTAGAACTTCACCTGTTGAGTCATCAGAAAAACTTTAAGAAAGATTCAATTTTTTCTA
CAGGCTTGAAAGAAGTATTCTGTAAATTTACGAGTGGGTATAAACCCAGCGAACATGTTACAAAGCTATTCGACGCAATA
TGCAATTGTAATGGTTTCAACCCAACTGAGATAAATAACTCCTCAGAACAATTAGTTAGCAATGCGAAATCATTTACAAA
AGAAGATTTAAATTCATTTCTATCAAAAACGAATAATGATAACAAAGGCTATGACTACTATAGTCGTATCAATGCTATTG
GTATATATAAGTTAGTTAGCGAAATGCCATTATTCAAGGAAGTAAAAGAGGAAGATCTTAATAAAGAAATAAATGATATT
TCTAAATCTCTTGGCTACCAATATTCAAGGGTTGAGAAAGATATAAGTATGTATAAATCAAATATTGAGAAGATGAAACA
AGCATTAGAAATTATCGCACTAAACCTAAAAACTAAATAA

Upstream 100 bases:

>100_bases
AACTATTGGAATCATTGAACGATAATAATGGTCGGTTTTCATGATCCTAGCTAAGTCGGGGGATAAGCTAAGGTCTCTTA
AGAATTAACTAGGTTTGGCA

Downstream 100 bases:

>100_bases
AAATAGATGTCATTTTTTTCGTCTTTTATCCTTCCAATCAATATAACTAATATAGATAACACCTATTGTGATAAATGATA
GAAGCGCAATAGAAAAAAAT

Product: Thf1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFCKFTSGYKPSEHVTKLFDAI
CNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNNDNKGYDYYSRINAIGIYKLVSEMPLFKEVKEEDLNKEINDI
SKSLGYQYSRVEKDISMYKSNIEKMKQALEIIALNLKTK

Sequences:

>Translated_199_residues
MSVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFCKFTSGYKPSEHVTKLFDAI
CNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNNDNKGYDYYSRINAIGIYKLVSEMPLFKEVKEEDLNKEINDI
SKSLGYQYSRVEKDISMYKSNIEKMKQALEIIALNLKTK
>Mature_198_residues
SVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVFCKFTSGYKPSEHVTKLFDAIC
NCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNNDNKGYDYYSRINAIGIYKLVSEMPLFKEVKEEDLNKEINDIS
KSLGYQYSRVEKDISMYKSNIEKMKQALEIIALNLKTK

Specific function: May be involved in photosynthetic membrane biogenesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THF1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): THF1_PROM1 (A2C211)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014786.1
- STRING:   A2C211
- GeneID:   4780192
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_09631
- eggNOG:   NOG08111
- HOGENOM:   HBG634536
- OMA:   RTVSDTK
- ProtClustDB:   PRK13266
- BioCyc:   PMAR167555:NATL1_09631-MONOMER
- HAMAP:   MF_01843
- InterPro:   IPR017499
- TIGRFAMs:   TIGR03060

Pfam domain/function: PF11264 ThylakoidFormat

EC number: NA

Molecular weight: Translated: 22898; Mature: 22767

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVF
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CKFTSGYKPSEHVTKLFDAICNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNND
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NKGYDYYSRINAIGIYKLVSEMPLFKEVKEEDLNKEINDISKSLGYQYSRVEKDISMYKS
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NIEKMKQALEIIALNLKTK
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVRATISDSKSDFHKEFPYVIPAIYRKLADELLVELHLLSHQKNFKKDSIFSTGLKEVF
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
CKFTSGYKPSEHVTKLFDAICNCNGFNPTEINNSSEQLVSNAKSFTKEDLNSFLSKTNND
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NKGYDYYSRINAIGIYKLVSEMPLFKEVKEEDLNKEINDISKSLGYQYSRVEKDISMYKS
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NIEKMKQALEIIALNLKTK
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA