| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025653
Identifier: 124025653
GI number: 124025653
Start: 872897
End: 873262
Strand: Reverse
Name: 124025653
Synonym: NATL1_09461
Alternate gene names: NA
Gene position: 873262-872897 (Counterclockwise)
Preceding gene: 124025662
Following gene: 124025652
Centisome position: 46.83
GC content: 33.88
Gene sequence:
>366_bases ATGACTTTTGATAGCCATAGCCTTGAGCGTCTAAAAGAGCTAGGACGTAAACTTCCCAAAGAGATCTCAAAACCTCAATC AAATGAAATAAATAATCAAAAAGAAACTAAAATACAACAGTTACACCCAGTTGAAACCGAAACTAACCCTGAACAACTTT TTCGAGAGTTGATGGAAATAAGTCCAGATGGGAACGTACCACCTCATTTACTAGAAAGACTAAAAAAACTTGAATCAAAT AATGTGAAAATTTCTTCCAATTCAGATCCACAGATCAATAAAAATTCTAATGATCTTTCAGCTGAAGATGCCCTAAACCT ATACACACAATTTCAACAATTTCTACTCGAAGATGATATCGATTAG
Upstream 100 bases:
>100_bases TCCAAACCACATTAGAAACGATCACATATTTCACTCAAATAAAAATAAATTATTTAAAATATACTCACAAGAAGATCTTC AATCAATATACATTTTAAAA
Downstream 100 bases:
>100_bases AAAAAAACTTTATGCTTAATATTTCACACTATAAAATCATTGCTATAGGAAAAATAAGAAAAAAGTGGATTCAAGAGGGT ATAGAAATGTACCTAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTFDSHSLERLKELGRKLPKEISKPQSNEINNQKETKIQQLHPVETETNPEQLFRELMEISPDGNVPPHLLERLKKLESN NVKISSNSDPQINKNSNDLSAEDALNLYTQFQQFLLEDDID
Sequences:
>Translated_121_residues MTFDSHSLERLKELGRKLPKEISKPQSNEINNQKETKIQQLHPVETETNPEQLFRELMEISPDGNVPPHLLERLKKLESN NVKISSNSDPQINKNSNDLSAEDALNLYTQFQQFLLEDDID >Mature_120_residues TFDSHSLERLKELGRKLPKEISKPQSNEINNQKETKIQQLHPVETETNPEQLFRELMEISPDGNVPPHLLERLKKLESNN VKISSNSDPQINKNSNDLSAEDALNLYTQFQQFLLEDDID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13998; Mature: 13867
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDSHSLERLKELGRKLPKEISKPQSNEINNQKETKIQQLHPVETETNPEQLFRELMEI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC SPDGNVPPHLLERLKKLESNNVKISSNSDPQINKNSNDLSAEDALNLYTQFQQFLLEDDI CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC D C >Mature Secondary Structure TFDSHSLERLKELGRKLPKEISKPQSNEINNQKETKIQQLHPVETETNPEQLFRELMEI CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHC SPDGNVPPHLLERLKKLESNNVKISSNSDPQINKNSNDLSAEDALNLYTQFQQFLLEDDI CCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA