| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025594
Identifier: 124025594
GI number: 124025594
Start: 825034
End: 825447
Strand: Reverse
Name: 124025594
Synonym: NATL1_08871
Alternate gene names: NA
Gene position: 825447-825034 (Counterclockwise)
Preceding gene: 124025595
Following gene: 124025593
Centisome position: 44.27
GC content: 32.37
Gene sequence:
>414_bases GTGGTAAATGTACAAGATGAGATTCTTGACTTATTAGAGAATTTGGCTGCAGCTGAGTACTATCATGAGTTCTTAAGGGA AAATGGAACCAAAGATTTTTTATTTATTCGCCCAAGTGGTAATCCAATCGATTCCGATGGGTTTAAAAAGATGACTTTGT GTGGAGATGTGATTGATAACTATTCAGAAATTATAGATATAGATAAATTAGAACTTCTCTCAGATACTAGTGCCATGTGT GTTTTTATTATGAGAGAAAATTTTGAATATAAAGGGATCAAAAATGATGACGTTGCCATATACACATCAATATTAAAGAA AATAAAAAATCAATGGATGTTTTCATTTATCCATAGATCTTCAGGAGAGGTGGATATGTCACTATGGAATCGTTTAAGAC AGTCCATGACATAG
Upstream 100 bases:
>100_bases TGATATTATTTTCTTTCAAGGAAGCAATAAAAAGATTTAAAAAGAATATTAGCTGCAATAATCATTATGACTAGTATTCG TAAGATTTGCTAATAGACAT
Downstream 100 bases:
>100_bases CGATTTAGATTTCCATAACTGAAGTTAAATCTTTTACGATATTGGTCAAATCTCAAATAATTGTTCAAATAAGTTGTCAT ATCATTTCAACAAAGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MVNVQDEILDLLENLAAAEYYHEFLRENGTKDFLFIRPSGNPIDSDGFKKMTLCGDVIDNYSEIIDIDKLELLSDTSAMC VFIMRENFEYKGIKNDDVAIYTSILKKIKNQWMFSFIHRSSGEVDMSLWNRLRQSMT
Sequences:
>Translated_137_residues MVNVQDEILDLLENLAAAEYYHEFLRENGTKDFLFIRPSGNPIDSDGFKKMTLCGDVIDNYSEIIDIDKLELLSDTSAMC VFIMRENFEYKGIKNDDVAIYTSILKKIKNQWMFSFIHRSSGEVDMSLWNRLRQSMT >Mature_137_residues MVNVQDEILDLLENLAAAEYYHEFLRENGTKDFLFIRPSGNPIDSDGFKKMTLCGDVIDNYSEIIDIDKLELLSDTSAMC VFIMRENFEYKGIKNDDVAIYTSILKKIKNQWMFSFIHRSSGEVDMSLWNRLRQSMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15964; Mature: 15964
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVQDEILDLLENLAAAEYYHEFLRENGTKDFLFIRPSGNPIDSDGFKKMTLCGDVIDN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH YSEIIDIDKLELLSDTSAMCVFIMRENFEYKGIKNDDVAIYTSILKKIKNQWMFSFIHRS HHHHHCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SGEVDMSLWNRLRQSMT CCCCCHHHHHHHHHHCC >Mature Secondary Structure MVNVQDEILDLLENLAAAEYYHEFLRENGTKDFLFIRPSGNPIDSDGFKKMTLCGDVIDN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH YSEIIDIDKLELLSDTSAMCVFIMRENFEYKGIKNDDVAIYTSILKKIKNQWMFSFIHRS HHHHHCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SGEVDMSLWNRLRQSMT CCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA