| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025593
Identifier: 124025593
GI number: 124025593
Start: 824148
End: 824708
Strand: Reverse
Name: 124025593
Synonym: NATL1_08861
Alternate gene names: NA
Gene position: 824708-824148 (Counterclockwise)
Preceding gene: 124025594
Following gene: 124025592
Centisome position: 44.23
GC content: 32.09
Gene sequence:
>561_bases ATGAGCGAGGCAGGAGATCATCCTAATATCCGGATAGAACCAGATTTATTGATTGCATTAAAATTAGAAGCAATTAAAAA TGGAATTTCATTATCTTCTTTGATAAACGAAAAACTAAAGCAATTTAATATAAAAACGAAGAATGAAATTCTTGAACAGA AGCTTCTAAGTATAGAGAAACGACTCAATTCACTCAGTAATTTCAAGTTAGAAATAGAGAACAAGGCTAATAATACTAGT AGTATTTTTTCTGATACTGGAGCAAAGAAATATGGTGAAGCTGCTAAGAATTTCTTCGACATGTACAGAGATAAAATGAA ACTAACCTTTAATGAGGCTTTTGATGAACTATCAAAAGTTCTTTATAAATACGAGGGTCAACCCGAAATGGTTCGTGCCC TACTAAGTGGAAAACATATTTTAACAGGTATAGAAATGACAAACGCTTATAGGAAAGGATCTTGTGCAATGAGAAGCGCT CTAAATGAATGGACCAAGTCCTCATCAGAGGACTTAAATAAAGCTTTTTTAGACGCAGTAATAATTGAAAATCTTAATTA A
Upstream 100 bases:
>100_bases GGTCAAGCACAAACCTAGTTTATTAAAAAACTAGAGAATTTGTAAAATTTTTAGCAAAGAAATTATTACTAGCTAAATTA GAAATGCTACTTACAAAAAA
Downstream 100 bases:
>100_bases TCGAATATTATAAAGGATTTAAATCCTAATGTTTCCTAGAAAAATTTAAAAAAAGTTATTAGATAATAAGGATGATAAAG TAGCAAATTAACTATGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSEAGDHPNIRIEPDLLIALKLEAIKNGISLSSLINEKLKQFNIKTKNEILEQKLLSIEKRLNSLSNFKLEIENKANNTS SIFSDTGAKKYGEAAKNFFDMYRDKMKLTFNEAFDELSKVLYKYEGQPEMVRALLSGKHILTGIEMTNAYRKGSCAMRSA LNEWTKSSSEDLNKAFLDAVIIENLN
Sequences:
>Translated_186_residues MSEAGDHPNIRIEPDLLIALKLEAIKNGISLSSLINEKLKQFNIKTKNEILEQKLLSIEKRLNSLSNFKLEIENKANNTS SIFSDTGAKKYGEAAKNFFDMYRDKMKLTFNEAFDELSKVLYKYEGQPEMVRALLSGKHILTGIEMTNAYRKGSCAMRSA LNEWTKSSSEDLNKAFLDAVIIENLN >Mature_185_residues SEAGDHPNIRIEPDLLIALKLEAIKNGISLSSLINEKLKQFNIKTKNEILEQKLLSIEKRLNSLSNFKLEIENKANNTSS IFSDTGAKKYGEAAKNFFDMYRDKMKLTFNEAFDELSKVLYKYEGQPEMVRALLSGKHILTGIEMTNAYRKGSCAMRSAL NEWTKSSSEDLNKAFLDAVIIENLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21088; Mature: 20957
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAGDHPNIRIEPDLLIALKLEAIKNGISLSSLINEKLKQFNIKTKNEILEQKLLSIEK CCCCCCCCCEEECCCEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLNSLSNFKLEIENKANNTSSIFSDTGAKKYGEAAKNFFDMYRDKMKLTFNEAFDELSKV HHHHHHCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYKYEGQPEMVRALLSGKHILTGIEMTNAYRKGSCAMRSALNEWTKSSSEDLNKAFLDAV HHHCCCCHHHHHHHHCCCHHEEHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH IIENLN HHHCCC >Mature Secondary Structure SEAGDHPNIRIEPDLLIALKLEAIKNGISLSSLINEKLKQFNIKTKNEILEQKLLSIEK CCCCCCCCEEECCCEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLNSLSNFKLEIENKANNTSSIFSDTGAKKYGEAAKNFFDMYRDKMKLTFNEAFDELSKV HHHHHHCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYKYEGQPEMVRALLSGKHILTGIEMTNAYRKGSCAMRSALNEWTKSSSEDLNKAFLDAV HHHCCCCHHHHHHHHCCCHHEEHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH IIENLN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA