| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is wcaI [C]
Identifier: 124025569
GI number: 124025569
Start: 792687
End: 793934
Strand: Reverse
Name: wcaI [C]
Synonym: NATL1_08621
Alternate gene names: 124025569
Gene position: 793934-792687 (Counterclockwise)
Preceding gene: 124025570
Following gene: 124025568
Centisome position: 42.58
GC content: 28.53
Gene sequence:
>1248_bases ATGTTAAAGATTTGGATGATAAATCAGTTTGCAAATACACCTGATTTGCCAGGGCATACAAGAAACTACGAAGTTGCTAA ATATTTAGTTAAAAATGGATGGAGAGTAGATTTATTTGCATCTGACTTTAATCTTAGTCAGAGAAAGTATTGCAAGTTAA AGAAATTTGAATTATTTAAAATCAATAAAATTGATGGAATAAAATGGCATTGGTTAAGAGTATCTTCTTATTCAATTAAT AATTGGAAAAGATATCTAAACATATTAAGTTTTTCAATTCATATATTTTTATTTCTTATATTAAAATCTATTCTATCTTT AAAAAGAGAGCAATTACCAAATATAATATTAGCTAGTTCTCCTCAATTACCAGCAGCATATTTTTGCTTAATAGTTTCAA AAATTCTCCATATACCATTGGTTTTAGAAATAAGAGATCTATGGCCACAAATTCTTATTGATCTAGGAGATAAAAGCAAA GAAAACATATTATATAGGATATTATATTGGATGGAGCTTTTATTATATAAGGAATCAAAAATTATAGTTATTTTATCTAA AGGGTCAAAGGAACATGTAGTAAAAAAAGGAGGGAAACTTATAAAATGGTTACCAAATGGGCCAGATCTAAGTAAATTCA AATTTTCAAGTCTACCTAATGAAGAATTAACTTTTTCTTTTAATAGACCCTTTAGATTGGTATATGCGGGAGCTCACAGC CAAGTTAATGGTTTGATGTACGTTTTGAATGCTGCTAAGTTATTGATCAATCACCCAATTGAAATTACATTGATAGGGGA TGGTCCAGAGAAAAATAATCTTGTTGAACAATCAAAAAAACTTGCTTTAAATAATGTAAAATTTTTAAAACCTCATTCTA AAGATAATATTCCAAAAATTCTATCTACATTCGATGCAATATTACTTTCACTAATAGATTCTGACCTATTTAGATATGGA ATATCTCCCAATAAGTTATATGATGCTTATGCTCTTGGAAGACCAGTAATAACTACTGTCCCAGGAATGATAAATGATGA AGTAGAGTCAAATAAATTAGGGACTACTTCAAGAGCATGTGATTCATCTTCATTATCATTAGCAATAAAAAGATTAATGA ACACATCAAGGAGAGATAGAGAAATGATGGGGATCAGAGCTAGATCTATAGCCGAAAAAACATATTCAAGAAATCGAATC AACAAAGAATATGATAAACTTCTGCGCTCATTAATACCTAATGAATAA
Upstream 100 bases:
>100_bases AAAAGTAAAAAGGAGAAGTTTATCAATCACAGGACCAATATCAGATAAGCATACTGTATTATCAGTTAAACTAAATATAA AATAGAAAATAATTAGTACA
Downstream 100 bases:
>100_bases TCAACTCCCACAATTGCCAGTCATTGTCTCTGGTGCGAATGGCTTTACGGGTAAATTTGTTTGTAAGGAATTAATTAAAA ACAAAATTAATTTTATAGCT
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Protein; WblI Protein; Lipopolysaccharides Biosynthesis Glycosyltransferase; Glycosyltransferase Protein; Phosphoserine Aminotransferase; A-Glycosyltransferase; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase Group 1 Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family; LPS Biosynthesis Related Glycosyltransferase; Glycosyl Transferase WbpJ; Glycosyl Transferase Family Protein; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLKIWMINQFANTPDLPGHTRNYEVAKYLVKNGWRVDLFASDFNLSQRKYCKLKKFELFKINKIDGIKWHWLRVSSYSIN NWKRYLNILSFSIHIFLFLILKSILSLKREQLPNIILASSPQLPAAYFCLIVSKILHIPLVLEIRDLWPQILIDLGDKSK ENILYRILYWMELLLYKESKIIVILSKGSKEHVVKKGGKLIKWLPNGPDLSKFKFSSLPNEELTFSFNRPFRLVYAGAHS QVNGLMYVLNAAKLLINHPIEITLIGDGPEKNNLVEQSKKLALNNVKFLKPHSKDNIPKILSTFDAILLSLIDSDLFRYG ISPNKLYDAYALGRPVITTVPGMINDEVESNKLGTTSRACDSSSLSLAIKRLMNTSRRDREMMGIRARSIAEKTYSRNRI NKEYDKLLRSLIPNE
Sequences:
>Translated_415_residues MLKIWMINQFANTPDLPGHTRNYEVAKYLVKNGWRVDLFASDFNLSQRKYCKLKKFELFKINKIDGIKWHWLRVSSYSIN NWKRYLNILSFSIHIFLFLILKSILSLKREQLPNIILASSPQLPAAYFCLIVSKILHIPLVLEIRDLWPQILIDLGDKSK ENILYRILYWMELLLYKESKIIVILSKGSKEHVVKKGGKLIKWLPNGPDLSKFKFSSLPNEELTFSFNRPFRLVYAGAHS QVNGLMYVLNAAKLLINHPIEITLIGDGPEKNNLVEQSKKLALNNVKFLKPHSKDNIPKILSTFDAILLSLIDSDLFRYG ISPNKLYDAYALGRPVITTVPGMINDEVESNKLGTTSRACDSSSLSLAIKRLMNTSRRDREMMGIRARSIAEKTYSRNRI NKEYDKLLRSLIPNE >Mature_415_residues MLKIWMINQFANTPDLPGHTRNYEVAKYLVKNGWRVDLFASDFNLSQRKYCKLKKFELFKINKIDGIKWHWLRVSSYSIN NWKRYLNILSFSIHIFLFLILKSILSLKREQLPNIILASSPQLPAAYFCLIVSKILHIPLVLEIRDLWPQILIDLGDKSK ENILYRILYWMELLLYKESKIIVILSKGSKEHVVKKGGKLIKWLPNGPDLSKFKFSSLPNEELTFSFNRPFRLVYAGAHS QVNGLMYVLNAAKLLINHPIEITLIGDGPEKNNLVEQSKKLALNNVKFLKPHSKDNIPKILSTFDAILLSLIDSDLFRYG ISPNKLYDAYALGRPVITTVPGMINDEVESNKLGTTSRACDSSSLSLAIKRLMNTSRRDREMMGIRARSIAEKTYSRNRI NKEYDKLLRSLIPNE
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47914; Mature: 47914
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIWMINQFANTPDLPGHTRNYEVAKYLVKNGWRVDLFASDFNLSQRKYCKLKKFELFK CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCEEEEE INKIDGIKWHWLRVSSYSINNWKRYLNILSFSIHIFLFLILKSILSLKREQLPNIILASS EECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PQLPAAYFCLIVSKILHIPLVLEIRDLWPQILIDLGDKSKENILYRILYWMELLLYKESK CCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC IIVILSKGSKEHVVKKGGKLIKWLPNGPDLSKFKFSSLPNEELTFSFNRPFRLVYAGAHS EEEEEECCCHHHHHHCCCCEEEECCCCCCCCCEECCCCCCCCEEEEECCCEEEEEECCCC QVNGLMYVLNAAKLLINHPIEITLIGDGPEKNNLVEQSKKLALNNVKFLKPHSKDNIPKI HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHH LSTFDAILLSLIDSDLFRYGISPNKLYDAYALGRPVITTVPGMINDEVESNKLGTTSRAC HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCC DSSSLSLAIKRLMNTSRRDREMMGIRARSIAEKTYSRNRINKEYDKLLRSLIPNE CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MLKIWMINQFANTPDLPGHTRNYEVAKYLVKNGWRVDLFASDFNLSQRKYCKLKKFELFK CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCEEEEE INKIDGIKWHWLRVSSYSINNWKRYLNILSFSIHIFLFLILKSILSLKREQLPNIILASS EECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PQLPAAYFCLIVSKILHIPLVLEIRDLWPQILIDLGDKSKENILYRILYWMELLLYKESK CCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC IIVILSKGSKEHVVKKGGKLIKWLPNGPDLSKFKFSSLPNEELTFSFNRPFRLVYAGAHS EEEEEECCCHHHHHHCCCCEEEECCCCCCCCCEECCCCCCCCEEEEECCCEEEEEECCCC QVNGLMYVLNAAKLLINHPIEITLIGDGPEKNNLVEQSKKLALNNVKFLKPHSKDNIPKI HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHH LSTFDAILLSLIDSDLFRYGISPNKLYDAYALGRPVITTVPGMINDEVESNKLGTTSRAC HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCC DSSSLSLAIKRLMNTSRRDREMMGIRARSIAEKTYSRNRINKEYDKLLRSLIPNE CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA