| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025570
Identifier: 124025570
GI number: 124025570
Start: 793950
End: 795752
Strand: Reverse
Name: 124025570
Synonym: NATL1_08631
Alternate gene names: NA
Gene position: 795752-793950 (Counterclockwise)
Preceding gene: 124025571
Following gene: 124025569
Centisome position: 42.67
GC content: 28.84
Gene sequence:
>1803_bases TTGAAAAGACTATTAATAACATTATATGATATTGGCCTGAAAAGGCTTTTTCAAAGATTATTATATGATTTCAAAAAATC TATAAATAAACTTTTACCATATCATTTATTTAATAACTCAAAAAGATTTAATCCTCATTTTTTAGACTTGCATCAAGAGT TGAATACATTTAAATATTCCCCTTCACATTTTAATAAATATATACCAAAAAAAATAGAATTTACTTTTATAAATAAAAAG AGATTACTAGATTTCCCTCTGAAATGGAATTCGTCTGAGTGGGGAAGATTATGGCAATTTAATTTACACTATTTTGATTG GTCACGTTCTATTCTAGAAGAATCTATTATAAATAATAAATGGACCGATGAATCAATAATATTAGAATATCTAATAGATA ATTGGATAAATTCTAATCTACCAGGAAGAGGTGATGGCTGGAACAGTTATACTCTATCTCTAAGAATAAGAAATTGGATA TGGATTTTTAGAACATGCCCTAGTTTTATTAATCAGAAAAGAGTTTATTCTCTTTGGTATCAAATATGTTGGTTACGAAA TCACCCTGAAGAATGTCATGGAGGCAATCATTGGATTGAAAATCTTATAACTTTGGTGATAGGTAGTCTTCAATTCAATG AAGTAAGATCTAAAGAAATCTACAGATACTCTTTATACAAATTAAAAAATGAACTTGAAAATCAAATTTTATTAGATGGT GGACATGAAGAAAGAAGTGCTAGTTATCATTTATTGATCTTGGATAGATTAGTTGAATTAGGTTGTGTTTTAGATAGTGT CAATGGATATAGGCCTATATGGCTACTAAAATCGATTGAATCTATGAATAAATGGTTAAAAATAACTTCAATATCTAATA AAAGGCTTCCACAGTTTAATGATTACTCAATTGACAGTAATTTAGATCTAAATATAGTCATATCTTTTGCAGATTCTTAT TTAAACAAAACTAATTATCTAAGCAAAGGTTTTAGATCAAAACTTCTATCCAATTATCCAAAGGATACACATATAGAAAC CTCATGTTTAAAACCAAATACTATTGAGATACCCTCAATCGTTGATCTAAAAGAAACTGGTTGGGTATTATTGCGTCCAG ATAAAAACTGGACACTTGCATTTAAATCTGGGAAAGCATGCCCAAACCATCTTCCCGCCCATGTTCATTCTGATATCTTA AGTTTCGATTTATTCAAAAATGGAATCCCAATATTTGTATCAGCTGGCACTAGTGAATATGGAAATTCAAAAAGAAGGTT CTATGAACGTTCGGGTCAAGCACACAATATCTTACAAATTGGTACTAGGAAGTATGGTAATTATAATAAAATAAATTGGA TTGAAGGTATAGATGTATGGGGATCTTTTAGAGCTGGTAAGAAATCAATGCCAACTTATCGAAAAAGTAAACAATTAAAA AATGGAGCACTTTATACATCAGGTATTTATGACACATATCAAAGATATGAAGCCTTTCATAAACGCTCTATACAAATGAG AATTGATAAATCAAACAACCTTATATTTTTATTAAAAGATATAATAAAAACGGAAAATCCCATTTTTATAAGACAATGGT GGCATCTAGGTGTTGACGCCGATGAAACTTTGCTAGAAAAGATAGCTACTCAGCTCATTAAAAATAAGAATTTGAAAGCA GAATATATCAATACATATTACTCTTCAGAATTGGGGAAAAAAGTAAAAAGGAGAAGTTTATCAATCACAGGACCAATATC AGATAAGCATACTGTATTATCAGTTAAACTAAATATAAAATAG
Upstream 100 bases:
>100_bases AGTGATCTTTATGTTTTCTTAGTGGCTCATAATGAATTTAAATATATTTCATTAAAGAATAGAGAATATTTAGATTTTTG CGGAGTAATAAATAAATAAC
Downstream 100 bases:
>100_bases AAAATAATTAGTACAATGTTAAAGATTTGGATGATAAATCAGTTTGCAAATACACCTGATTTGCCAGGGCATACAAGAAA CTACGAAGTTGCTAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Heparinase; Heparinase II/III-Like Protein; Heparinase II/III-Like
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKRLLITLYDIGLKRLFQRLLYDFKKSINKLLPYHLFNNSKRFNPHFLDLHQELNTFKYSPSHFNKYIPKKIEFTFINKK RLLDFPLKWNSSEWGRLWQFNLHYFDWSRSILEESIINNKWTDESIILEYLIDNWINSNLPGRGDGWNSYTLSLRIRNWI WIFRTCPSFINQKRVYSLWYQICWLRNHPEECHGGNHWIENLITLVIGSLQFNEVRSKEIYRYSLYKLKNELENQILLDG GHEERSASYHLLILDRLVELGCVLDSVNGYRPIWLLKSIESMNKWLKITSISNKRLPQFNDYSIDSNLDLNIVISFADSY LNKTNYLSKGFRSKLLSNYPKDTHIETSCLKPNTIEIPSIVDLKETGWVLLRPDKNWTLAFKSGKACPNHLPAHVHSDIL SFDLFKNGIPIFVSAGTSEYGNSKRRFYERSGQAHNILQIGTRKYGNYNKINWIEGIDVWGSFRAGKKSMPTYRKSKQLK NGALYTSGIYDTYQRYEAFHKRSIQMRIDKSNNLIFLLKDIIKTENPIFIRQWWHLGVDADETLLEKIATQLIKNKNLKA EYINTYYSSELGKKVKRRSLSITGPISDKHTVLSVKLNIK
Sequences:
>Translated_600_residues MKRLLITLYDIGLKRLFQRLLYDFKKSINKLLPYHLFNNSKRFNPHFLDLHQELNTFKYSPSHFNKYIPKKIEFTFINKK RLLDFPLKWNSSEWGRLWQFNLHYFDWSRSILEESIINNKWTDESIILEYLIDNWINSNLPGRGDGWNSYTLSLRIRNWI WIFRTCPSFINQKRVYSLWYQICWLRNHPEECHGGNHWIENLITLVIGSLQFNEVRSKEIYRYSLYKLKNELENQILLDG GHEERSASYHLLILDRLVELGCVLDSVNGYRPIWLLKSIESMNKWLKITSISNKRLPQFNDYSIDSNLDLNIVISFADSY LNKTNYLSKGFRSKLLSNYPKDTHIETSCLKPNTIEIPSIVDLKETGWVLLRPDKNWTLAFKSGKACPNHLPAHVHSDIL SFDLFKNGIPIFVSAGTSEYGNSKRRFYERSGQAHNILQIGTRKYGNYNKINWIEGIDVWGSFRAGKKSMPTYRKSKQLK NGALYTSGIYDTYQRYEAFHKRSIQMRIDKSNNLIFLLKDIIKTENPIFIRQWWHLGVDADETLLEKIATQLIKNKNLKA EYINTYYSSELGKKVKRRSLSITGPISDKHTVLSVKLNIK >Mature_600_residues MKRLLITLYDIGLKRLFQRLLYDFKKSINKLLPYHLFNNSKRFNPHFLDLHQELNTFKYSPSHFNKYIPKKIEFTFINKK RLLDFPLKWNSSEWGRLWQFNLHYFDWSRSILEESIINNKWTDESIILEYLIDNWINSNLPGRGDGWNSYTLSLRIRNWI WIFRTCPSFINQKRVYSLWYQICWLRNHPEECHGGNHWIENLITLVIGSLQFNEVRSKEIYRYSLYKLKNELENQILLDG GHEERSASYHLLILDRLVELGCVLDSVNGYRPIWLLKSIESMNKWLKITSISNKRLPQFNDYSIDSNLDLNIVISFADSY LNKTNYLSKGFRSKLLSNYPKDTHIETSCLKPNTIEIPSIVDLKETGWVLLRPDKNWTLAFKSGKACPNHLPAHVHSDIL SFDLFKNGIPIFVSAGTSEYGNSKRRFYERSGQAHNILQIGTRKYGNYNKINWIEGIDVWGSFRAGKKSMPTYRKSKQLK NGALYTSGIYDTYQRYEAFHKRSIQMRIDKSNNLIFLLKDIIKTENPIFIRQWWHLGVDADETLLEKIATQLIKNKNLKA EYINTYYSSELGKKVKRRSLSITGPISDKHTVLSVKLNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70917; Mature: 70917
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLITLYDIGLKRLFQRLLYDFKKSINKLLPYHLFNNSKRFNPHFLDLHQELNTFKYS CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCC PSHFNKYIPKKIEFTFINKKRLLDFPLKWNSSEWGRLWQFNLHYFDWSRSILEESIINNK HHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHCCC WTDESIILEYLIDNWINSNLPGRGDGWNSYTLSLRIRNWIWIFRTCPSFINQKRVYSLWY CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECEEEEEHHHHHHHHHHHHHHHHH QICWLRNHPEECHGGNHWIENLITLVIGSLQFNEVRSKEIYRYSLYKLKNELENQILLDG HHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GHEERSASYHLLILDRLVELGCVLDSVNGYRPIWLLKSIESMNKWLKITSISNKRLPQFN CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCC DYSIDSNLDLNIVISFADSYLNKTNYLSKGFRSKLLSNYPKDTHIETSCLKPNTIEIPSI CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCE VDLKETGWVLLRPDKNWTLAFKSGKACPNHLPAHVHSDILSFDLFKNGIPIFVSAGTSEY EEECCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC GNSKRRFYERSGQAHNILQIGTRKYGNYNKINWIEGIDVWGSFRAGKKSMPTYRKSKQLK CCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHC NGALYTSGIYDTYQRYEAFHKRSIQMRIDKSNNLIFLLKDIIKTENPIFIRQWWHLGVDA CCCEEECCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHCCCCCEEEEEEEECCCCC DETLLEKIATQLIKNKNLKAEYINTYYSSELGKKVKRRSLSITGPISDKHTVLSVKLNIK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEECC >Mature Secondary Structure MKRLLITLYDIGLKRLFQRLLYDFKKSINKLLPYHLFNNSKRFNPHFLDLHQELNTFKYS CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCC PSHFNKYIPKKIEFTFINKKRLLDFPLKWNSSEWGRLWQFNLHYFDWSRSILEESIINNK HHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHCCC WTDESIILEYLIDNWINSNLPGRGDGWNSYTLSLRIRNWIWIFRTCPSFINQKRVYSLWY CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECEEEEEHHHHHHHHHHHHHHHHH QICWLRNHPEECHGGNHWIENLITLVIGSLQFNEVRSKEIYRYSLYKLKNELENQILLDG HHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GHEERSASYHLLILDRLVELGCVLDSVNGYRPIWLLKSIESMNKWLKITSISNKRLPQFN CCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCC DYSIDSNLDLNIVISFADSYLNKTNYLSKGFRSKLLSNYPKDTHIETSCLKPNTIEIPSI CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCE VDLKETGWVLLRPDKNWTLAFKSGKACPNHLPAHVHSDILSFDLFKNGIPIFVSAGTSEY EEECCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC GNSKRRFYERSGQAHNILQIGTRKYGNYNKINWIEGIDVWGSFRAGKKSMPTYRKSKQLK CCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHC NGALYTSGIYDTYQRYEAFHKRSIQMRIDKSNNLIFLLKDIIKTENPIFIRQWWHLGVDA CCCEEECCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHCCCCCEEEEEEEECCCCC DETLLEKIATQLIKNKNLKAEYINTYYSSELGKKVKRRSLSITGPISDKHTVLSVKLNIK HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA